Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC019129.2-201ENST00000609837 1235 ntBASIC21.96■■□□□ 1.11
RTL9Q8NET4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.96■■□□□ 1.11
RTL9Q8NET4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RTL9Q8NET4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.11
RTL9Q8NET4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTL9Q8NET4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTL9Q8NET4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RTL9Q8NET4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.95■■□□□ 1.1
RTL9Q8NET4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTL9Q8NET4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTL9Q8NET4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTL9Q8NET4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTL9Q8NET4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTL9Q8NET4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
RTL9Q8NET4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
RTL9Q8NET4 BX005266.1-201ENST00000473402 457 ntBASIC21.95■■□□□ 1.1
RTL9Q8NET4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.95■■□□□ 1.1
RTL9Q8NET4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.95■■□□□ 1.1
RTL9Q8NET4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.95■■□□□ 1.1
RTL9Q8NET4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.95■■□□□ 1.1
RTL9Q8NET4 AC073592.5-201ENST00000624854 528 ntBASIC21.95■■□□□ 1.1
RTL9Q8NET4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.95■■□□□ 1.1
RTL9Q8NET4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTL9Q8NET4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTL9Q8NET4 TNXA-203ENST00000507684 2038 ntBASIC21.95■■□□□ 1.1
RTL9Q8NET4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTL9Q8NET4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
RTL9Q8NET4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTL9Q8NET4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RTL9Q8NET4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTL9Q8NET4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTL9Q8NET4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
RTL9Q8NET4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTL9Q8NET4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RTL9Q8NET4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTL9Q8NET4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RTL9Q8NET4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTL9Q8NET4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTL9Q8NET4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTL9Q8NET4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.94■■□□□ 1.1
RTL9Q8NET4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.94■■□□□ 1.1
RTL9Q8NET4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.94■■□□□ 1.1
RTL9Q8NET4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.94■■□□□ 1.1
RTL9Q8NET4 AL356488.2-201ENST00000602755 427 ntBASIC21.94■■□□□ 1.1
RTL9Q8NET4 Z83851.2-201ENST00000609564 659 ntBASIC21.94■■□□□ 1.1
RTL9Q8NET4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTL9Q8NET4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTL9Q8NET4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTL9Q8NET4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTL9Q8NET4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.94■■□□□ 1.1
RTL9Q8NET4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTL9Q8NET4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTL9Q8NET4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.93■■□□□ 1.1
RTL9Q8NET4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTL9Q8NET4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.93■■□□□ 1.1
RTL9Q8NET4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTL9Q8NET4 AP002414.3-201ENST00000589352 1468 ntBASIC21.93■■□□□ 1.1
RTL9Q8NET4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.93■■□□□ 1.1
RTL9Q8NET4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.93■■□□□ 1.1
RTL9Q8NET4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.93■■□□□ 1.1
RTL9Q8NET4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.93■■□□□ 1.1
RTL9Q8NET4 DDX43P3-201ENST00000441064 443 ntBASIC21.93■■□□□ 1.1
RTL9Q8NET4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.93■■□□□ 1.1
RTL9Q8NET4 AC092910.1-201ENST00000482027 1129 ntBASIC21.93■■□□□ 1.1
RTL9Q8NET4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.93■■□□□ 1.1
RTL9Q8NET4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.93■■□□□ 1.1
RTL9Q8NET4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTL9Q8NET4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTL9Q8NET4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTL9Q8NET4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.93■■□□□ 1.1
RTL9Q8NET4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTL9Q8NET4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.93■■□□□ 1.1
RTL9Q8NET4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTL9Q8NET4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RTL9Q8NET4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTL9Q8NET4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTL9Q8NET4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTL9Q8NET4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
RTL9Q8NET4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTL9Q8NET4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.93■■□□□ 1.1
RTL9Q8NET4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTL9Q8NET4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTL9Q8NET4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTL9Q8NET4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTL9Q8NET4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RTL9Q8NET4 AC132938.5-201ENST00000624980 1813 ntBASIC21.92■■□□□ 1.1
RTL9Q8NET4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.92■■□□□ 1.1
RTL9Q8NET4 AC073621.1-201ENST00000392730 636 ntBASIC21.92■■□□□ 1.1
RTL9Q8NET4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.92■■□□□ 1.1
RTL9Q8NET4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.92■■□□□ 1.1
RTL9Q8NET4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.92■■□□□ 1.1
RTL9Q8NET4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.92■■□□□ 1.1
RTL9Q8NET4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.92■■□□□ 1.1
RTL9Q8NET4 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.92■■□□□ 1.1
RTL9Q8NET4 RNA5SP415-201ENST00000517246 115 ntBASIC21.92■■□□□ 1.1
RTL9Q8NET4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.92■■□□□ 1.1
RTL9Q8NET4 AC027601.4-201ENST00000611259 610 ntBASIC21.92■■□□□ 1.1
RTL9Q8NET4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTL9Q8NET4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTL9Q8NET4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms