Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 TP73-AS1-210ENST00000637775 1455 ntBASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 AC007967.3-201ENST00000434308 558 ntBASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 AC096582.2-201ENST00000510860 516 ntBASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01555Q8NAE3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
LINC01555Q8NAE3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.21■□□□□ 0.34
LINC01555Q8NAE3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LINC01555Q8NAE3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
LINC01555Q8NAE3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 AC009533.2-201ENST00000543664 586 ntBASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01555Q8NAE3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 AC012317.2-201ENST00000623305 2251 ntBASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 RCN1P2-201ENST00000398357 915 ntBASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 NUS1P2-201ENST00000417358 873 ntBASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 TSPY19P-201ENST00000418461 509 ntBASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 SLC25A6P5-201ENST00000435663 894 ntBASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 TSPY18P-201ENST00000441642 509 ntBASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 AC011467.2-201ENST00000598425 242 ntBASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 AL732292.2-201ENST00000609649 430 ntBASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 AC114341.1-201ENST00000618070 349 ntBASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01555Q8NAE3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms