Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX31Q8N9S9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SNX31Q8N9S9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 AC073912.3-201ENST00000624414 853 ntBASIC17.69■□□□□ 0.42
SNX31Q8N9S9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX31Q8N9S9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 AL645608.8-201ENST00000606034 2086 ntBASIC17.68■□□□□ 0.42
SNX31Q8N9S9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 FLJ13224-201ENST00000313737 1514 ntBASIC17.68■□□□□ 0.42
SNX31Q8N9S9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 MIR3917-201ENST00000580971 93 ntBASIC17.68■□□□□ 0.42
SNX31Q8N9S9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 AC140113.3-201ENST00000605663 199 ntBASIC17.68■□□□□ 0.42
SNX31Q8N9S9 AL023973.1-201ENST00000624619 620 ntBASIC17.68■□□□□ 0.42
SNX31Q8N9S9 AL157888.1-201ENST00000631930 593 ntBASIC17.68■□□□□ 0.42
SNX31Q8N9S9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 AC009053.2-201ENST00000563701 2365 ntBASIC17.68■□□□□ 0.42
SNX31Q8N9S9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX31Q8N9S9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX31Q8N9S9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms