Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MIR3687-2-201ENST00000577708 61 ntBASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 AP001160.2-201ENST00000596071 487 ntBASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 MIR3687-1-201ENST00000614492 61 ntBASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 SIGLEC16-201ENST00000599858 1437 ntBASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NPAS3Q8IXF0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 RNF165-205ENST00000588679 2904 ntBASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 AC073621.1-201ENST00000392730 636 ntBASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 SPDYE21P-201ENST00000413323 827 ntBASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 AC002347.1-201ENST00000569543 541 ntBASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS3Q8IXF0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
NPAS3Q8IXF0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
NPAS3Q8IXF0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 AC120498.9-201ENST00000339021 3867 ntBASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 PRYP5-201ENST00000451909 266 ntBASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 AC004967.1-201ENST00000453589 447 ntBASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 AC126763.1-201ENST00000552015 2118 ntBASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 AC005593.1-201ENST00000624894 515 ntBASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS3Q8IXF0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.44■□□□□ 0.54
NPAS3Q8IXF0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.44■□□□□ 0.54
NPAS3Q8IXF0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
NPAS3Q8IXF0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS3Q8IXF0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.44■□□□□ 0.54
NPAS3Q8IXF0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS3Q8IXF0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.44■□□□□ 0.54
NPAS3Q8IXF0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS3Q8IXF0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS3Q8IXF0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS3Q8IXF0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS3Q8IXF0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms