Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM42Q8IWZ5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.89■□□□□ 0.46
TRIM42Q8IWZ5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.89■□□□□ 0.46
TRIM42Q8IWZ5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM42Q8IWZ5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 AC036111.1-201ENST00000533973 1582 ntBASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 AC008550.1-201ENST00000511500 884 ntBASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM42Q8IWZ5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 CR392000.1-201ENST00000624770 1228 ntBASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 AC011676.5-201ENST00000624864 2660 ntBASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 KRT8P7-201ENST00000533003 1432 ntBASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM42Q8IWZ5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 MIR6786-201ENST00000616843 113 ntBASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 HOXB1-202ENST00000577092 1414 ntBASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM42Q8IWZ5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms