Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC136632.2-201ENST00000512891 861 ntBASIC19.32■□□□□ 0.68
HERC6Q8IVU3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 MIR4469-201ENST00000583919 79 ntBASIC19.32■□□□□ 0.68
HERC6Q8IVU3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.31■□□□□ 0.68
HERC6Q8IVU3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 AC254562.1-201ENST00000417586 456 ntBASIC19.31■□□□□ 0.68
HERC6Q8IVU3 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 ALG1L5P-201ENST00000482043 771 ntBASIC19.31■□□□□ 0.68
HERC6Q8IVU3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 AC073592.4-201ENST00000623827 446 ntBASIC19.31■□□□□ 0.68
HERC6Q8IVU3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 PMPCAP1-201ENST00000508114 1576 ntBASIC19.31■□□□□ 0.68
HERC6Q8IVU3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC6Q8IVU3 TNXA-203ENST00000507684 2038 ntBASIC19.3■□□□□ 0.68
HERC6Q8IVU3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 AC002310.6-201ENST00000624451 1377 ntBASIC19.3■□□□□ 0.68
HERC6Q8IVU3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC6Q8IVU3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 PRYP5-201ENST00000451909 266 ntBASIC19.29■□□□□ 0.68
HERC6Q8IVU3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms