Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NPAS4Q8IUM7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 AL049757.1-201ENST00000616842 1596 ntBASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.1■□□□□ 0.65
NPAS4Q8IUM7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 AC120498.9-201ENST00000339021 3867 ntBASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 AC132938.5-201ENST00000624980 1813 ntBASIC19.09■□□□□ 0.65
NPAS4Q8IUM7 NCF1C-201ENST00000438382 1427 ntBASIC19.08■□□□□ 0.65
NPAS4Q8IUM7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.08■□□□□ 0.65
NPAS4Q8IUM7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NPAS4Q8IUM7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPAS4Q8IUM7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.65
NPAS4Q8IUM7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPAS4Q8IUM7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
NPAS4Q8IUM7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.08■□□□□ 0.65
NPAS4Q8IUM7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
NPAS4Q8IUM7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPAS4Q8IUM7 AC006504.4-201ENST00000592118 1568 ntBASIC19.08■□□□□ 0.65
NPAS4Q8IUM7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 KLF4P1-201ENST00000412782 1185 ntBASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 MCCD1P2-201ENST00000423228 335 ntBASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 KRT18P2-201ENST00000447938 1258 ntBASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 CROCCP3-202ENST00000420820 1947 ntBASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.08■□□□□ 0.64
NPAS4Q8IUM7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.07■□□□□ 0.64
NPAS4Q8IUM7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS4Q8IUM7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS4Q8IUM7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS4Q8IUM7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
NPAS4Q8IUM7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS4Q8IUM7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS4Q8IUM7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.07■□□□□ 0.64
NPAS4Q8IUM7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.07■□□□□ 0.64
NPAS4Q8IUM7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NPAS4Q8IUM7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS4Q8IUM7 AC003669.1-201ENST00000334569 611 ntBASIC19.07■□□□□ 0.64
NPAS4Q8IUM7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms