Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 CRYGFP-201ENST00000418459 633 ntBASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 AP003041.3-201ENST00000527151 707 ntBASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 AL023803.3-201ENST00000615559 522 ntBASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 AC112497.1-201ENST00000624824 639 ntBASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRTM1Q86UE6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 AC092666.2-201ENST00000613287 246 ntBASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms