Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.9■□□□□ 0.46
LDB1Q86U70 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.9■□□□□ 0.46
LDB1Q86U70 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.9■□□□□ 0.46
LDB1Q86U70 MIR662-201ENST00000384847 95 ntBASIC17.9■□□□□ 0.46
LDB1Q86U70 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.9■□□□□ 0.46
LDB1Q86U70 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.9■□□□□ 0.46
LDB1Q86U70 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LDB1Q86U70 AP003733.1-201ENST00000491725 852 ntBASIC17.9■□□□□ 0.46
LDB1Q86U70 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.9■□□□□ 0.46
LDB1Q86U70 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.9■□□□□ 0.46
LDB1Q86U70 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LDB1Q86U70 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.9■□□□□ 0.46
LDB1Q86U70 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.9■□□□□ 0.46
LDB1Q86U70 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LDB1Q86U70 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LDB1Q86U70 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
LDB1Q86U70 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.9■□□□□ 0.46
LDB1Q86U70 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LDB1Q86U70 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LDB1Q86U70 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
LDB1Q86U70 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB1Q86U70 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.89■□□□□ 0.45
LDB1Q86U70 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB1Q86U70 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB1Q86U70 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
LDB1Q86U70 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LDB1Q86U70 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.89■□□□□ 0.45
LDB1Q86U70 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LDB1Q86U70 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB1Q86U70 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.89■□□□□ 0.45
LDB1Q86U70 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LDB1Q86U70 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LDB1Q86U70 RNF126P1-202ENST00000569893 925 ntBASIC17.89■□□□□ 0.45
LDB1Q86U70 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.89■□□□□ 0.45
LDB1Q86U70 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LDB1Q86U70 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.89■□□□□ 0.45
LDB1Q86U70 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.89■□□□□ 0.45
LDB1Q86U70 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.89■□□□□ 0.45
LDB1Q86U70 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB1Q86U70 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LDB1Q86U70 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LDB1Q86U70 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LDB1Q86U70 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
LDB1Q86U70 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LDB1Q86U70 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LDB1Q86U70 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LDB1Q86U70 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LDB1Q86U70 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LDB1Q86U70 IGHGP-201ENST00000390555 1178 ntBASIC17.88■□□□□ 0.45
LDB1Q86U70 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.88■□□□□ 0.45
LDB1Q86U70 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.88■□□□□ 0.45
LDB1Q86U70 AL671277.2-201ENST00000458060 996 ntBASIC17.88■□□□□ 0.45
LDB1Q86U70 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.88■□□□□ 0.45
LDB1Q86U70 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.88■□□□□ 0.45
LDB1Q86U70 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.88■□□□□ 0.45
LDB1Q86U70 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.88■□□□□ 0.45
LDB1Q86U70 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.88■□□□□ 0.45
LDB1Q86U70 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
LDB1Q86U70 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.88■□□□□ 0.45
LDB1Q86U70 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LDB1Q86U70 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LDB1Q86U70 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LDB1Q86U70 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.88■□□□□ 0.45
LDB1Q86U70 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LDB1Q86U70 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.88■□□□□ 0.45
LDB1Q86U70 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LDB1Q86U70 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LDB1Q86U70 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.87■□□□□ 0.45
LDB1Q86U70 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LDB1Q86U70 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LDB1Q86U70 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LDB1Q86U70 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LDB1Q86U70 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LDB1Q86U70 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LDB1Q86U70 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
LDB1Q86U70 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.87■□□□□ 0.45
LDB1Q86U70 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.87■□□□□ 0.45
LDB1Q86U70 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.87■□□□□ 0.45
LDB1Q86U70 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.87■□□□□ 0.45
LDB1Q86U70 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.87■□□□□ 0.45
LDB1Q86U70 AC005332.3-201ENST00000589904 676 ntBASIC17.87■□□□□ 0.45
LDB1Q86U70 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.87■□□□□ 0.45
LDB1Q86U70 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.87■□□□□ 0.45
LDB1Q86U70 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LDB1Q86U70 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LDB1Q86U70 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LDB1Q86U70 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.87■□□□□ 0.45
LDB1Q86U70 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LDB1Q86U70 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LDB1Q86U70 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LDB1Q86U70 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.86■□□□□ 0.45
LDB1Q86U70 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms