Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.98■□□□□ 0.95
USP50Q70EL3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP50Q70EL3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.98■□□□□ 0.95
USP50Q70EL3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP50Q70EL3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP50Q70EL3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
USP50Q70EL3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP50Q70EL3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP50Q70EL3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.97■□□□□ 0.95
USP50Q70EL3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP50Q70EL3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.97■□□□□ 0.95
USP50Q70EL3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.97■□□□□ 0.95
USP50Q70EL3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP50Q70EL3 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.97■□□□□ 0.95
USP50Q70EL3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP50Q70EL3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
USP50Q70EL3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.97■□□□□ 0.95
USP50Q70EL3 AC005225.4-201ENST00000557330 545 ntBASIC20.97■□□□□ 0.95
USP50Q70EL3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.97■□□□□ 0.95
USP50Q70EL3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP50Q70EL3 AC009093.7-201ENST00000623853 1223 ntBASIC20.97■□□□□ 0.95
USP50Q70EL3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP50Q70EL3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
USP50Q70EL3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.97■□□□□ 0.95
USP50Q70EL3 AC093484.2-201ENST00000580996 2166 ntBASIC20.97■□□□□ 0.95
USP50Q70EL3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP50Q70EL3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
USP50Q70EL3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP50Q70EL3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP50Q70EL3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.97■□□□□ 0.95
USP50Q70EL3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP50Q70EL3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP50Q70EL3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.96■□□□□ 0.95
USP50Q70EL3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP50Q70EL3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.96■□□□□ 0.95
USP50Q70EL3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP50Q70EL3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP50Q70EL3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.96■□□□□ 0.95
USP50Q70EL3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.96■□□□□ 0.95
USP50Q70EL3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
USP50Q70EL3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP50Q70EL3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.96■□□□□ 0.95
USP50Q70EL3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.96■□□□□ 0.95
USP50Q70EL3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP50Q70EL3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
USP50Q70EL3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.96■□□□□ 0.95
USP50Q70EL3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
USP50Q70EL3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP50Q70EL3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
USP50Q70EL3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP50Q70EL3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP50Q70EL3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
USP50Q70EL3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.95■□□□□ 0.94
USP50Q70EL3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
USP50Q70EL3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
USP50Q70EL3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.95■□□□□ 0.94
USP50Q70EL3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.95■□□□□ 0.94
USP50Q70EL3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.95■□□□□ 0.94
USP50Q70EL3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
USP50Q70EL3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.95■□□□□ 0.94
USP50Q70EL3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.95■□□□□ 0.94
USP50Q70EL3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.95■□□□□ 0.94
USP50Q70EL3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 TERF1P3-201ENST00000505638 1227 ntBASIC20.95■□□□□ 0.94
USP50Q70EL3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.95■□□□□ 0.94
USP50Q70EL3 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.95■□□□□ 0.94
USP50Q70EL3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.95■□□□□ 0.94
USP50Q70EL3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.95■□□□□ 0.94
USP50Q70EL3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.95■□□□□ 0.94
USP50Q70EL3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
USP50Q70EL3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.95■□□□□ 0.94
USP50Q70EL3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP50Q70EL3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP50Q70EL3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP50Q70EL3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
USP50Q70EL3 AC018445.3-201ENST00000624177 1945 ntBASIC20.94■□□□□ 0.94
USP50Q70EL3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
USP50Q70EL3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP50Q70EL3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP50Q70EL3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP50Q70EL3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP50Q70EL3 AL627223.1-201ENST00000416693 442 ntBASIC20.94■□□□□ 0.94
USP50Q70EL3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP50Q70EL3 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.94■□□□□ 0.94
USP50Q70EL3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms