Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13CQ709C8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13CQ709C8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
VPS13CQ709C8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS13CQ709C8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13CQ709C8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13CQ709C8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13CQ709C8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13CQ709C8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13CQ709C8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13CQ709C8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13CQ709C8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13CQ709C8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13CQ709C8 MTCL1P1-201ENST00000446207 792 ntBASIC14.82□□□□□ -0.04
VPS13CQ709C8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 AC093520.2-201ENST00000561830 333 ntBASIC14.82□□□□□ -0.04
VPS13CQ709C8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.82□□□□□ -0.04
VPS13CQ709C8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13CQ709C8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13CQ709C8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13CQ709C8 AC007274.1-201ENST00000439805 662 ntBASIC14.82□□□□□ -0.04
VPS13CQ709C8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 AC022145.2-201ENST00000598203 171 ntBASIC14.82□□□□□ -0.04
VPS13CQ709C8 KRT8P47-201ENST00000604727 1398 ntBASIC14.82□□□□□ -0.04
VPS13CQ709C8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13CQ709C8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13CQ709C8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13CQ709C8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13CQ709C8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
VPS13CQ709C8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13CQ709C8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13CQ709C8 SPDYE21P-201ENST00000413323 827 ntBASIC14.81□□□□□ -0.04
VPS13CQ709C8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 AC010654.1-201ENST00000615722 808 ntBASIC14.81□□□□□ -0.04
VPS13CQ709C8 AL035252.4-201ENST00000624174 288 ntBASIC14.81□□□□□ -0.04
VPS13CQ709C8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13CQ709C8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13CQ709C8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13CQ709C8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13CQ709C8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13CQ709C8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13CQ709C8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13CQ709C8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 BX005266.1-201ENST00000473402 457 ntBASIC14.81□□□□□ -0.04
VPS13CQ709C8 AP000344.2-201ENST00000512987 629 ntBASIC14.81□□□□□ -0.04
VPS13CQ709C8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 AL589182.2-201ENST00000619332 1049 ntBASIC14.81□□□□□ -0.04
VPS13CQ709C8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13CQ709C8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13CQ709C8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VPS13CQ709C8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13CQ709C8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13CQ709C8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13CQ709C8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VPS13CQ709C8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13CQ709C8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
VPS13CQ709C8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13CQ709C8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13CQ709C8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13CQ709C8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13CQ709C8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13CQ709C8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13CQ709C8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13CQ709C8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13CQ709C8 TSEN15P1-201ENST00000423257 515 ntBASIC14.8□□□□□ -0.04
VPS13CQ709C8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13CQ709C8 AC015911.4-201ENST00000588022 1070 ntBASIC14.8□□□□□ -0.04
VPS13CQ709C8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13CQ709C8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13CQ709C8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms