Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 AL356309.3-201ENST00000624132 1934 ntBASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 AC103564.2-201ENST00000432853 1299 ntBASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 AC018712.1-201ENST00000455767 687 ntBASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 RNPS1P1-201ENST00000507437 918 ntBASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 RNA5SP419-201ENST00000515908 135 ntBASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 AC148477.8-201ENST00000624298 468 ntBASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SLC27A1Q6PCB7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 SART3-203ENST00000546611 1184 ntBASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 AL139288.1-201ENST00000623748 933 ntBASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC27A1Q6PCB7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 AL031284.1-201ENST00000419297 478 ntBASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 AD001527.2-201ENST00000622994 785 ntBASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 PMPCAP1-201ENST00000508114 1576 ntBASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC27A1Q6PCB7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms