Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 LINC00304-203ENST00000565008 1864 ntBASIC18.61■□□□□ 0.57
TRNP1Q6NT89 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 AC125634.1-201ENST00000438758 1403 ntBASIC18.61■□□□□ 0.57
TRNP1Q6NT89 KRT18P1-202ENST00000452408 1331 ntBASIC18.61■□□□□ 0.57
TRNP1Q6NT89 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 DRAXINP1-201ENST00000437611 948 ntBASIC18.61■□□□□ 0.57
TRNP1Q6NT89 DDX43P3-201ENST00000441064 443 ntBASIC18.61■□□□□ 0.57
TRNP1Q6NT89 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 AL138831.2-201ENST00000606564 490 ntBASIC18.61■□□□□ 0.57
TRNP1Q6NT89 AC069148.1-201ENST00000608741 768 ntBASIC18.61■□□□□ 0.57
TRNP1Q6NT89 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRNP1Q6NT89 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 AC233702.3-201ENST00000578656 1387 ntBASIC18.6■□□□□ 0.57
TRNP1Q6NT89 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 LETM1P2-201ENST00000597330 2178 ntBASIC18.6■□□□□ 0.57
TRNP1Q6NT89 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.6■□□□□ 0.57
TRNP1Q6NT89 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 ATP5G2P1-201ENST00000433580 426 ntBASIC18.59■□□□□ 0.57
TRNP1Q6NT89 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 AC092119.3-201ENST00000612618 583 ntBASIC18.59■□□□□ 0.57
TRNP1Q6NT89 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRNP1Q6NT89 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRNP1Q6NT89 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRNP1Q6NT89 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TRNP1Q6NT89 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRNP1Q6NT89 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRNP1Q6NT89 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRNP1Q6NT89 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRNP1Q6NT89 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms