Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 OR7E47P-204ENST00000575924 449 ntBASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CDC42BPAQ5VT25 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CDC42BPAQ5VT25 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CDC42BPAQ5VT25 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 CD82-202ENST00000342935 967 ntTSL 5 BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 ACTG1P4-201ENST00000425123 1122 ntBASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPAQ5VT25 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 AP002414.1-201ENST00000391405 1147 ntBASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 PRSS29P-201ENST00000440800 595 ntBASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 VN2R19P-201ENST00000442399 1052 ntBASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 AL031432.2-201ENST00000566714 459 ntBASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 AL928711.1-201ENST00000570165 459 ntBASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 ORC5-208ENST00000626700 344 ntTSL 3 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 AC093677.2-201ENST00000600169 1863 ntBASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 METTL26-205ENST00000397666 726 ntTSL 2 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 TSEN15P1-201ENST00000423257 515 ntBASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 LINC02084-201ENST00000606069 1096 ntBASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
CDC42BPAQ5VT25 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDC42BPAQ5VT25 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC26.86■■□□□ 1.89
CDC42BPAQ5VT25 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CDC42BPAQ5VT25 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC26.86■■□□□ 1.89
CDC42BPAQ5VT25 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC26.86■■□□□ 1.89
CDC42BPAQ5VT25 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDC42BPAQ5VT25 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDC42BPAQ5VT25 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC26.86■■□□□ 1.89
CDC42BPAQ5VT25 PON3-203ENST00000427422 894 ntTSL 3 BASIC26.86■■□□□ 1.89
CDC42BPAQ5VT25 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC26.86■■□□□ 1.89
CDC42BPAQ5VT25 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC26.86■■□□□ 1.89
CDC42BPAQ5VT25 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC26.86■■□□□ 1.89
CDC42BPAQ5VT25 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDC42BPAQ5VT25 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CDC42BPAQ5VT25 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 AL353135.1-201ENST00000606729 504 ntBASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 SIGLEC30P-201ENST00000455569 941 ntBASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 CITED2-204ENST00000618718 901 ntTSL 2 BASIC26.85■■□□□ 1.89
CDC42BPAQ5VT25 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
CDC42BPAQ5VT25 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPAQ5VT25 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPAQ5VT25 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPAQ5VT25 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPAQ5VT25 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPAQ5VT25 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CDC42BPAQ5VT25 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC26.84■■□□□ 1.89
CDC42BPAQ5VT25 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPAQ5VT25 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPAQ5VT25 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC26.84■■□□□ 1.89
CDC42BPAQ5VT25 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC26.84■■□□□ 1.89
CDC42BPAQ5VT25 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPAQ5VT25 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPAQ5VT25 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDC42BPAQ5VT25 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDC42BPAQ5VT25 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms