Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 HOXB1-202ENST00000577092 1414 ntBASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 ECEL1P3-201ENST00000427961 737 ntBASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 AC073508.3-201ENST00000619697 1419 ntBASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 AC011270.2-201ENST00000624293 2550 ntBASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF1Q5TC12 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 AP000523.1-201ENST00000398242 1049 ntBASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 LIN28AP1-201ENST00000429574 405 ntBASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 AL137013.1-201ENST00000432946 1228 ntBASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 AC141257.4-201ENST00000634557 245 ntBASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 AC136944.6-201ENST00000634818 245 ntBASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 AC036111.1-201ENST00000533973 1582 ntBASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 AL356309.3-201ENST00000624132 1934 ntBASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 AL139384.1-201ENST00000612143 3047 ntBASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF1Q5TC12 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ATPAF1Q5TC12 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms