Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 AC112777.1-201ENST00000540175 1423 ntBASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 STARP1-201ENST00000397973 869 ntBASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 GPALPP1-207ENST00000611650 899 ntBASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRFAM7AQ494W8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CHRFAM7AQ494W8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CHRFAM7AQ494W8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CHRFAM7AQ494W8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CHRFAM7AQ494W8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.71■□□□□ 0.1
CHRFAM7AQ494W8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHRFAM7AQ494W8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 NEK4P2-201ENST00000580004 1012 ntBASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 AC092119.3-201ENST00000612618 583 ntBASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 AC068587.9-201ENST00000641814 219 ntBASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 AC134043.2-201ENST00000624206 2238 ntBASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRFAM7AQ494W8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 KRT8P45-201ENST00000414328 1447 ntBASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CHRFAM7AQ494W8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms