Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
CNTNAP1P78357 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP1P78357 MRPL20P1-201ENST00000400819 433 ntBASIC21.19■□□□□ 0.98
CNTNAP1P78357 MEIS3P1-201ENST00000495167 958 ntBASIC21.19■□□□□ 0.98
CNTNAP1P78357 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP1P78357 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP1P78357 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.19■□□□□ 0.98
CNTNAP1P78357 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.19■□□□□ 0.98
CNTNAP1P78357 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP1P78357 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.19■□□□□ 0.98
CNTNAP1P78357 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP1P78357 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP1P78357 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP1P78357 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.19■□□□□ 0.98
CNTNAP1P78357 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP1P78357 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP1P78357 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP1P78357 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.18■□□□□ 0.98
CNTNAP1P78357 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP1P78357 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP1P78357 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.18■□□□□ 0.98
CNTNAP1P78357 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP1P78357 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP1P78357 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP1P78357 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.18■□□□□ 0.98
CNTNAP1P78357 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.18■□□□□ 0.98
CNTNAP1P78357 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP1P78357 AC022494.1-201ENST00000466044 728 ntBASIC21.18■□□□□ 0.98
CNTNAP1P78357 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.18■□□□□ 0.98
CNTNAP1P78357 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.18■□□□□ 0.98
CNTNAP1P78357 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.18■□□□□ 0.98
CNTNAP1P78357 AL022326.1-202ENST00000641533 845 ntBASIC21.18■□□□□ 0.98
CNTNAP1P78357 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP1P78357 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP1P78357 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP1P78357 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.18■□□□□ 0.98
CNTNAP1P78357 AC126763.1-201ENST00000552015 2118 ntBASIC21.18■□□□□ 0.98
CNTNAP1P78357 AC004817.3-201ENST00000602957 2129 ntBASIC21.18■□□□□ 0.98
CNTNAP1P78357 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CNTNAP1P78357 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNTNAP1P78357 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNTNAP1P78357 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNTNAP1P78357 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.17■□□□□ 0.98
CNTNAP1P78357 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNTNAP1P78357 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.17■□□□□ 0.98
CNTNAP1P78357 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNTNAP1P78357 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.17■□□□□ 0.98
CNTNAP1P78357 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.17■□□□□ 0.98
CNTNAP1P78357 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNTNAP1P78357 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.17■□□□□ 0.98
CNTNAP1P78357 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CNTNAP1P78357 HCG4B-203ENST00000450128 991 ntBASIC21.17■□□□□ 0.98
CNTNAP1P78357 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.17■□□□□ 0.98
CNTNAP1P78357 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNTNAP1P78357 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC21.17■□□□□ 0.98
CNTNAP1P78357 RNA5SP421-201ENST00000516864 134 ntBASIC21.17■□□□□ 0.98
CNTNAP1P78357 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.17■□□□□ 0.98
CNTNAP1P78357 AC025678.2-201ENST00000562061 970 ntBASIC21.17■□□□□ 0.98
CNTNAP1P78357 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.17■□□□□ 0.98
CNTNAP1P78357 AL390955.2-201ENST00000603032 514 ntBASIC21.17■□□□□ 0.98
CNTNAP1P78357 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNTNAP1P78357 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.17■□□□□ 0.98
CNTNAP1P78357 AL031598.1-201ENST00000561511 1773 ntBASIC21.17■□□□□ 0.98
CNTNAP1P78357 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNTNAP1P78357 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNTNAP1P78357 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.17■□□□□ 0.98
CNTNAP1P78357 AC093010.1-201ENST00000473625 1624 ntBASIC21.16■□□□□ 0.98
CNTNAP1P78357 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNTNAP1P78357 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNTNAP1P78357 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNTNAP1P78357 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNTNAP1P78357 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNTNAP1P78357 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 SIGLEC30P-201ENST00000455569 941 ntBASIC21.16■□□□□ 0.98
CNTNAP1P78357 AC122714.2-201ENST00000502787 707 ntBASIC21.16■□□□□ 0.98
CNTNAP1P78357 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 AC004835.2-201ENST00000603762 682 ntBASIC21.16■□□□□ 0.98
CNTNAP1P78357 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNTNAP1P78357 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNTNAP1P78357 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNTNAP1P78357 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNTNAP1P78357 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CNTNAP1P78357 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms