Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RPS4XP62701 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RPS4XP62701 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.18■□□□□ 0.18
RPS4XP62701 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.18■□□□□ 0.18
RPS4XP62701 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 RASA4DP-201ENST00000460726 1199 ntBASIC16.18■□□□□ 0.18
RPS4XP62701 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.18■□□□□ 0.18
RPS4XP62701 ZNF444P1-201ENST00000559497 298 ntBASIC16.18■□□□□ 0.18
RPS4XP62701 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.18■□□□□ 0.18
RPS4XP62701 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RPS4XP62701 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
RPS4XP62701 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RPS4XP62701 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
RPS4XP62701 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.17■□□□□ 0.18
RPS4XP62701 AL355312.1-201ENST00000407115 2176 ntBASIC16.17■□□□□ 0.18
RPS4XP62701 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.17■□□□□ 0.18
RPS4XP62701 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.17■□□□□ 0.18
RPS4XP62701 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.17■□□□□ 0.18
RPS4XP62701 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.17■□□□□ 0.18
RPS4XP62701 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
RPS4XP62701 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RPS4XP62701 HCG4P8-203ENST00000443049 980 ntBASIC16.17■□□□□ 0.18
RPS4XP62701 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.17■□□□□ 0.18
RPS4XP62701 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.17■□□□□ 0.18
RPS4XP62701 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.17■□□□□ 0.18
RPS4XP62701 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.17■□□□□ 0.18
RPS4XP62701 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RPS4XP62701 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.17■□□□□ 0.18
RPS4XP62701 LINC01311-201ENST00000565162 1445 ntBASIC16.17■□□□□ 0.18
RPS4XP62701 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RPS4XP62701 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.17■□□□□ 0.18
RPS4XP62701 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPS4XP62701 PP12613-201ENST00000424958 2230 ntBASIC16.17■□□□□ 0.18
RPS4XP62701 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.17■□□□□ 0.18
RPS4XP62701 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.16■□□□□ 0.18
RPS4XP62701 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.16■□□□□ 0.18
RPS4XP62701 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4XP62701 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4XP62701 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4XP62701 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4XP62701 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.16■□□□□ 0.18
RPS4XP62701 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.16■□□□□ 0.18
RPS4XP62701 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.16■□□□□ 0.18
RPS4XP62701 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4XP62701 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4XP62701 AL645608.8-201ENST00000606034 2086 ntBASIC16.16■□□□□ 0.18
RPS4XP62701 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4XP62701 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RPS4XP62701 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4XP62701 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.16■□□□□ 0.18
RPS4XP62701 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.16■□□□□ 0.18
RPS4XP62701 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
RPS4XP62701 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.16■□□□□ 0.18
RPS4XP62701 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4XP62701 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4XP62701 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.16■□□□□ 0.18
RPS4XP62701 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.16■□□□□ 0.18
RPS4XP62701 AC024563.2-201ENST00000603282 481 ntBASIC16.16■□□□□ 0.18
RPS4XP62701 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RPS4XP62701 AC079602.3-201ENST00000623931 403 ntBASIC16.16■□□□□ 0.18
RPS4XP62701 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
RPS4XP62701 HCG11-201ENST00000411553 5696 ntBASIC16.16■□□□□ 0.18
RPS4XP62701 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4XP62701 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms