Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSX2P58304 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VSX2P58304 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.14■□□□□ 0.33
VSX2P58304 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.14■□□□□ 0.33
VSX2P58304 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSX2P58304 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VSX2P58304 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSX2P58304 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSX2P58304 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.14■□□□□ 0.33
VSX2P58304 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSX2P58304 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
VSX2P58304 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
VSX2P58304 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
VSX2P58304 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VSX2P58304 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VSX2P58304 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.14■□□□□ 0.33
VSX2P58304 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.14■□□□□ 0.33
VSX2P58304 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.14■□□□□ 0.33
VSX2P58304 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.14■□□□□ 0.33
VSX2P58304 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.14■□□□□ 0.33
VSX2P58304 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.14■□□□□ 0.33
VSX2P58304 AC099336.1-202ENST00000602961 463 ntBASIC17.14■□□□□ 0.33
VSX2P58304 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VSX2P58304 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VSX2P58304 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.14■□□□□ 0.33
VSX2P58304 NSUN5P1-202ENST00000421140 1535 ntBASIC17.14■□□□□ 0.33
VSX2P58304 NSUN5P2-203ENST00000457352 1529 ntBASIC17.14■□□□□ 0.33
VSX2P58304 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSX2P58304 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSX2P58304 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.14■□□□□ 0.33
VSX2P58304 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSX2P58304 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VSX2P58304 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
VSX2P58304 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.14■□□□□ 0.33
VSX2P58304 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.14■□□□□ 0.33
VSX2P58304 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VSX2P58304 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.14■□□□□ 0.33
VSX2P58304 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.14■□□□□ 0.33
VSX2P58304 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
VSX2P58304 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
VSX2P58304 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.13■□□□□ 0.33
VSX2P58304 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.13■□□□□ 0.33
VSX2P58304 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.13■□□□□ 0.33
VSX2P58304 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.13■□□□□ 0.33
VSX2P58304 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VSX2P58304 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 IGHV3-47-201ENST00000425060 335 ntBASIC17.13■□□□□ 0.33
VSX2P58304 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.13■□□□□ 0.33
VSX2P58304 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.13■□□□□ 0.33
VSX2P58304 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.13■□□□□ 0.33
VSX2P58304 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.13■□□□□ 0.33
VSX2P58304 AC138894.3-201ENST00000603787 634 ntBASIC17.13■□□□□ 0.33
VSX2P58304 AL353801.3-201ENST00000609898 542 ntBASIC17.13■□□□□ 0.33
VSX2P58304 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.13■□□□□ 0.33
VSX2P58304 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VSX2P58304 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.13■□□□□ 0.33
VSX2P58304 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
VSX2P58304 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.13■□□□□ 0.33
VSX2P58304 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.13■□□□□ 0.33
VSX2P58304 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VSX2P58304 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.13■□□□□ 0.33
VSX2P58304 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VSX2P58304 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VSX2P58304 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VSX2P58304 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VSX2P58304 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VSX2P58304 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VSX2P58304 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VSX2P58304 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VSX2P58304 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VSX2P58304 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VSX2P58304 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VSX2P58304 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VSX2P58304 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VSX2P58304 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VSX2P58304 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VSX2P58304 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VSX2P58304 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
VSX2P58304 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VSX2P58304 NUS1P1-201ENST00000446295 882 ntBASIC17.12■□□□□ 0.33
VSX2P58304 FOSL1P1-201ENST00000511041 816 ntBASIC17.12■□□□□ 0.33
VSX2P58304 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.12■□□□□ 0.33
VSX2P58304 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms