Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
HDAC4P56524 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HDAC4P56524 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.72■□□□□ 0.59
HDAC4P56524 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.72■□□□□ 0.59
HDAC4P56524 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.72■□□□□ 0.59
HDAC4P56524 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.72■□□□□ 0.59
HDAC4P56524 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.72■□□□□ 0.59
HDAC4P56524 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.72■□□□□ 0.59
HDAC4P56524 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.72■□□□□ 0.59
HDAC4P56524 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.72■□□□□ 0.59
HDAC4P56524 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.72■□□□□ 0.59
HDAC4P56524 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.72■□□□□ 0.59
HDAC4P56524 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HDAC4P56524 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HDAC4P56524 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.72■□□□□ 0.59
HDAC4P56524 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.72■□□□□ 0.59
HDAC4P56524 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 AC022898.2-201ENST00000616822 1312 ntBASIC18.72■□□□□ 0.59
HDAC4P56524 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 AC134043.2-201ENST00000624206 2238 ntBASIC18.72■□□□□ 0.59
HDAC4P56524 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HDAC4P56524 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
HDAC4P56524 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HDAC4P56524 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HDAC4P56524 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.71■□□□□ 0.59
HDAC4P56524 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.71■□□□□ 0.59
HDAC4P56524 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.71■□□□□ 0.59
HDAC4P56524 AC012317.2-201ENST00000623305 2251 ntBASIC18.71■□□□□ 0.59
HDAC4P56524 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
HDAC4P56524 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HDAC4P56524 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.71■□□□□ 0.59
HDAC4P56524 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HDAC4P56524 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.71■□□□□ 0.59
HDAC4P56524 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HDAC4P56524 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HDAC4P56524 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.71■□□□□ 0.59
HDAC4P56524 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.71■□□□□ 0.59
HDAC4P56524 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HDAC4P56524 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.71■□□□□ 0.59
HDAC4P56524 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
HDAC4P56524 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HDAC4P56524 AC010331.1-201ENST00000611423 582 ntBASIC18.71■□□□□ 0.59
HDAC4P56524 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HDAC4P56524 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HDAC4P56524 AC006116.8-202ENST00000587620 1550 ntBASIC18.71■□□□□ 0.59
HDAC4P56524 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HDAC4P56524 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.71■□□□□ 0.59
HDAC4P56524 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HDAC4P56524 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HDAC4P56524 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
HDAC4P56524 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HDAC4P56524 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.7■□□□□ 0.58
HDAC4P56524 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC4P56524 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.7■□□□□ 0.58
HDAC4P56524 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC4P56524 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC4P56524 KRT8P47-201ENST00000604727 1398 ntBASIC18.7■□□□□ 0.58
HDAC4P56524 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC4P56524 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HDAC4P56524 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HDAC4P56524 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC4P56524 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.7■□□□□ 0.58
HDAC4P56524 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC4P56524 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.7■□□□□ 0.58
HDAC4P56524 TSPY22P-201ENST00000427496 604 ntBASIC18.7■□□□□ 0.58
HDAC4P56524 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.7■□□□□ 0.58
HDAC4P56524 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HDAC4P56524 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.7■□□□□ 0.58
HDAC4P56524 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.7■□□□□ 0.58
HDAC4P56524 AL445228.2-201ENST00000605589 952 ntBASIC18.7■□□□□ 0.58
HDAC4P56524 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HDAC4P56524 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.7■□□□□ 0.58
HDAC4P56524 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC4P56524 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.7■□□□□ 0.58
HDAC4P56524 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC4P56524 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HDAC4P56524 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.7■□□□□ 0.58
HDAC4P56524 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.69■□□□□ 0.58
HDAC4P56524 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC4P56524 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC4P56524 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC4P56524 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC4P56524 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC4P56524 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC4P56524 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC4P56524 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HDAC4P56524 MIR1224-201ENST00000408193 85 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms