Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.21■□□□□ 0.35
EPHA4P54764 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.21■□□□□ 0.35
EPHA4P54764 AC018712.1-201ENST00000455767 687 ntBASIC17.21■□□□□ 0.35
EPHA4P54764 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.21■□□□□ 0.35
EPHA4P54764 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.21■□□□□ 0.35
EPHA4P54764 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
EPHA4P54764 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.21■□□□□ 0.35
EPHA4P54764 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.21■□□□□ 0.35
EPHA4P54764 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA4P54764 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
EPHA4P54764 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
EPHA4P54764 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA4P54764 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA4P54764 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA4P54764 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA4P54764 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
EPHA4P54764 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EPHA4P54764 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
EPHA4P54764 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
EPHA4P54764 WIZP1-201ENST00000531444 2299 ntBASIC17.21■□□□□ 0.34
EPHA4P54764 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
EPHA4P54764 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
EPHA4P54764 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.2■□□□□ 0.34
EPHA4P54764 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 KRT8P47-201ENST00000604727 1398 ntBASIC17.2■□□□□ 0.34
EPHA4P54764 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.2■□□□□ 0.34
EPHA4P54764 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.2■□□□□ 0.34
EPHA4P54764 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.2■□□□□ 0.34
EPHA4P54764 AL031284.1-201ENST00000419297 478 ntBASIC17.2■□□□□ 0.34
EPHA4P54764 AC093909.1-201ENST00000504731 1122 ntBASIC17.2■□□□□ 0.34
EPHA4P54764 AC079776.4-201ENST00000511039 504 ntBASIC17.2■□□□□ 0.34
EPHA4P54764 RNA5SP419-201ENST00000515908 135 ntBASIC17.2■□□□□ 0.34
EPHA4P54764 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
EPHA4P54764 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.2■□□□□ 0.34
EPHA4P54764 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.2■□□□□ 0.34
EPHA4P54764 BX640515.1-201ENST00000617215 977 ntBASIC17.2■□□□□ 0.34
EPHA4P54764 AL139288.1-201ENST00000623748 933 ntBASIC17.2■□□□□ 0.34
EPHA4P54764 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.2■□□□□ 0.34
EPHA4P54764 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
EPHA4P54764 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
EPHA4P54764 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.2■□□□□ 0.34
EPHA4P54764 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
EPHA4P54764 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
EPHA4P54764 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
EPHA4P54764 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EPHA4P54764 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA4P54764 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA4P54764 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA4P54764 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHA4P54764 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA4P54764 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA4P54764 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.19■□□□□ 0.34
EPHA4P54764 AL022342.1-201ENST00000400363 863 ntBASIC17.19■□□□□ 0.34
EPHA4P54764 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
EPHA4P54764 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.19■□□□□ 0.34
EPHA4P54764 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.19■□□□□ 0.34
EPHA4P54764 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.19■□□□□ 0.34
EPHA4P54764 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHA4P54764 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
EPHA4P54764 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHA4P54764 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.19■□□□□ 0.34
EPHA4P54764 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.19■□□□□ 0.34
EPHA4P54764 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA4P54764 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
EPHA4P54764 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.19■□□□□ 0.34
EPHA4P54764 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.19■□□□□ 0.34
EPHA4P54764 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
EPHA4P54764 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA4P54764 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.19■□□□□ 0.34
EPHA4P54764 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA4P54764 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA4P54764 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA4P54764 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
EPHA4P54764 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.19■□□□□ 0.34
EPHA4P54764 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
EPHA4P54764 AL096828.2-201ENST00000567259 1965 ntBASIC17.19■□□□□ 0.34
EPHA4P54764 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
EPHA4P54764 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA4P54764 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
EPHA4P54764 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EPHA4P54764 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
EPHA4P54764 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.18■□□□□ 0.34
EPHA4P54764 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms