Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
EPHB4P54760 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB4P54760 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHB4P54760 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHB4P54760 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHB4P54760 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHB4P54760 RCN1P2-201ENST00000398357 915 ntBASIC20.12■□□□□ 0.81
EPHB4P54760 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHB4P54760 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB4P54760 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB4P54760 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.12■□□□□ 0.81
EPHB4P54760 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.12■□□□□ 0.81
EPHB4P54760 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHB4P54760 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB4P54760 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHB4P54760 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.12■□□□□ 0.81
EPHB4P54760 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.12■□□□□ 0.81
EPHB4P54760 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB4P54760 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
EPHB4P54760 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB4P54760 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB4P54760 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHB4P54760 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB4P54760 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB4P54760 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB4P54760 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB4P54760 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB4P54760 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
EPHB4P54760 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.11■□□□□ 0.81
EPHB4P54760 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB4P54760 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB4P54760 AC068880.1-201ENST00000507289 2297 ntBASIC20.11■□□□□ 0.81
EPHB4P54760 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB4P54760 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB4P54760 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB4P54760 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.11■□□□□ 0.81
EPHB4P54760 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
EPHB4P54760 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB4P54760 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB4P54760 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
EPHB4P54760 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
EPHB4P54760 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB4P54760 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB4P54760 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.11■□□□□ 0.81
EPHB4P54760 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.11■□□□□ 0.81
EPHB4P54760 GPX1P2-201ENST00000429271 606 ntBASIC20.11■□□□□ 0.81
EPHB4P54760 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.11■□□□□ 0.81
EPHB4P54760 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.11■□□□□ 0.81
EPHB4P54760 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
EPHB4P54760 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB4P54760 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.11■□□□□ 0.81
EPHB4P54760 AC027601.4-201ENST00000611259 610 ntBASIC20.11■□□□□ 0.81
EPHB4P54760 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB4P54760 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB4P54760 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
EPHB4P54760 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
EPHB4P54760 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.11■□□□□ 0.81
EPHB4P54760 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB4P54760 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB4P54760 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.1■□□□□ 0.81
EPHB4P54760 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.1■□□□□ 0.81
EPHB4P54760 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.1■□□□□ 0.81
EPHB4P54760 AC112482.1-201ENST00000492080 688 ntBASIC20.1■□□□□ 0.81
EPHB4P54760 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.1■□□□□ 0.81
EPHB4P54760 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.1■□□□□ 0.81
EPHB4P54760 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.1■□□□□ 0.81
EPHB4P54760 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.1■□□□□ 0.81
EPHB4P54760 MTDHP3-201ENST00000594186 672 ntBASIC20.1■□□□□ 0.81
EPHB4P54760 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.1■□□□□ 0.81
EPHB4P54760 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.1■□□□□ 0.81
EPHB4P54760 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
EPHB4P54760 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
EPHB4P54760 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.1■□□□□ 0.81
EPHB4P54760 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.1■□□□□ 0.81
EPHB4P54760 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB4P54760 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB4P54760 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.09■□□□□ 0.81
EPHB4P54760 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB4P54760 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
EPHB4P54760 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB4P54760 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB4P54760 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
EPHB4P54760 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EPHB4P54760 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.09■□□□□ 0.81
EPHB4P54760 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
EPHB4P54760 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms