Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.66■□□□□ 0.74
ATN1P54259 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.66■□□□□ 0.74
ATN1P54259 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
ATN1P54259 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ATN1P54259 KRT8P47-201ENST00000604727 1398 ntBASIC19.66■□□□□ 0.74
ATN1P54259 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
ATN1P54259 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.66■□□□□ 0.74
ATN1P54259 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ATN1P54259 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATN1P54259 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.65■□□□□ 0.74
ATN1P54259 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.65■□□□□ 0.74
ATN1P54259 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATN1P54259 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATN1P54259 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.65■□□□□ 0.74
ATN1P54259 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATN1P54259 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATN1P54259 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ATN1P54259 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.65■□□□□ 0.74
ATN1P54259 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.65■□□□□ 0.74
ATN1P54259 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATN1P54259 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.65■□□□□ 0.74
ATN1P54259 AC092474.2-201ENST00000424288 719 ntBASIC19.65■□□□□ 0.74
ATN1P54259 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.65■□□□□ 0.74
ATN1P54259 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.65■□□□□ 0.74
ATN1P54259 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.65■□□□□ 0.74
ATN1P54259 PAWRP1-201ENST00000451083 565 ntBASIC19.65■□□□□ 0.74
ATN1P54259 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.65■□□□□ 0.74
ATN1P54259 IGHV3-65-201ENST00000523210 341 ntBASIC19.65■□□□□ 0.74
ATN1P54259 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.65■□□□□ 0.74
ATN1P54259 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.65■□□□□ 0.74
ATN1P54259 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.65■□□□□ 0.74
ATN1P54259 AL096865.1-201ENST00000606796 927 ntBASIC19.65■□□□□ 0.74
ATN1P54259 AC004877.2-201ENST00000623941 599 ntBASIC19.65■□□□□ 0.74
ATN1P54259 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC19.65■□□□□ 0.74
ATN1P54259 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.65■□□□□ 0.74
ATN1P54259 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ATN1P54259 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATN1P54259 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATN1P54259 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ATN1P54259 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATN1P54259 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
ATN1P54259 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ATN1P54259 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATN1P54259 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ATN1P54259 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
ATN1P54259 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATN1P54259 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATN1P54259 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATN1P54259 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.64■□□□□ 0.73
ATN1P54259 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATN1P54259 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.64■□□□□ 0.73
ATN1P54259 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.64■□□□□ 0.73
ATN1P54259 IGLL3P-201ENST00000412472 434 ntBASIC19.64■□□□□ 0.73
ATN1P54259 AL020989.1-201ENST00000422979 469 ntBASIC19.64■□□□□ 0.73
ATN1P54259 PRSS29P-201ENST00000440800 595 ntBASIC19.64■□□□□ 0.73
ATN1P54259 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.64■□□□□ 0.73
ATN1P54259 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.64■□□□□ 0.73
ATN1P54259 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.64■□□□□ 0.73
ATN1P54259 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATN1P54259 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.64■□□□□ 0.73
ATN1P54259 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATN1P54259 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.64■□□□□ 0.73
ATN1P54259 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.64■□□□□ 0.73
ATN1P54259 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATN1P54259 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATN1P54259 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ATN1P54259 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATN1P54259 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATN1P54259 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
ATN1P54259 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ATN1P54259 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 AC132938.6-201ENST00000623828 1655 ntBASIC19.63■□□□□ 0.73
ATN1P54259 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.63■□□□□ 0.73
ATN1P54259 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.63■□□□□ 0.73
ATN1P54259 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.63■□□□□ 0.73
ATN1P54259 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
ATN1P54259 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ATN1P54259 BCAR1-209ENST00000546196 1340 ntBASIC19.63■□□□□ 0.73
ATN1P54259 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ATN1P54259 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.63■□□□□ 0.73
ATN1P54259 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ATN1P54259 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATN1P54259 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms