Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.64■□□□□ 0.73
ACLYP53396 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.64■□□□□ 0.73
ACLYP53396 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ACLYP53396 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.64■□□□□ 0.73
ACLYP53396 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ACLYP53396 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ACLYP53396 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ACLYP53396 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.64■□□□□ 0.73
ACLYP53396 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ACLYP53396 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.64■□□□□ 0.73
ACLYP53396 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACLYP53396 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ACLYP53396 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ACLYP53396 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.63■□□□□ 0.73
ACLYP53396 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACLYP53396 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACLYP53396 AC093010.1-201ENST00000473625 1624 ntBASIC19.63■□□□□ 0.73
ACLYP53396 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
ACLYP53396 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ACLYP53396 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACLYP53396 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.63■□□□□ 0.73
ACLYP53396 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.63■□□□□ 0.73
ACLYP53396 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.63■□□□□ 0.73
ACLYP53396 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
ACLYP53396 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.63■□□□□ 0.73
ACLYP53396 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACLYP53396 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACLYP53396 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ACLYP53396 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ACLYP53396 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACLYP53396 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.62■□□□□ 0.73
ACLYP53396 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACLYP53396 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.62■□□□□ 0.73
ACLYP53396 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.62■□□□□ 0.73
ACLYP53396 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
ACLYP53396 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ACLYP53396 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.62■□□□□ 0.73
ACLYP53396 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACLYP53396 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.62■□□□□ 0.73
ACLYP53396 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACLYP53396 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ACLYP53396 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.62■□□□□ 0.73
ACLYP53396 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
ACLYP53396 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.62■□□□□ 0.73
ACLYP53396 IGLL3P-201ENST00000412472 434 ntBASIC19.62■□□□□ 0.73
ACLYP53396 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.62■□□□□ 0.73
ACLYP53396 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.62■□□□□ 0.73
ACLYP53396 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.62■□□□□ 0.73
ACLYP53396 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.62■□□□□ 0.73
ACLYP53396 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.62■□□□□ 0.73
ACLYP53396 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.62■□□□□ 0.73
ACLYP53396 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.62■□□□□ 0.73
ACLYP53396 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.62■□□□□ 0.73
ACLYP53396 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACLYP53396 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACLYP53396 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACLYP53396 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACLYP53396 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACLYP53396 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ACLYP53396 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
ACLYP53396 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
ACLYP53396 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ACLYP53396 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACLYP53396 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACLYP53396 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACLYP53396 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACLYP53396 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ACLYP53396 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.61■□□□□ 0.73
ACLYP53396 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ACLYP53396 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ACLYP53396 KLF4P1-201ENST00000412782 1185 ntBASIC19.61■□□□□ 0.73
ACLYP53396 SIGLEC30P-201ENST00000455569 941 ntBASIC19.61■□□□□ 0.73
ACLYP53396 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.61■□□□□ 0.73
ACLYP53396 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.61■□□□□ 0.73
ACLYP53396 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.61■□□□□ 0.73
ACLYP53396 DUTP2-201ENST00000519164 463 ntBASIC19.61■□□□□ 0.73
ACLYP53396 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.61■□□□□ 0.73
ACLYP53396 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACLYP53396 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
ACLYP53396 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACLYP53396 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACLYP53396 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACLYP53396 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACLYP53396 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ACLYP53396 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACLYP53396 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ACLYP53396 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ACLYP53396 PHGDH-209ENST00000641074 1780 ntBASIC19.6■□□□□ 0.73
ACLYP53396 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
ACLYP53396 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ACLYP53396 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.6■□□□□ 0.73
ACLYP53396 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.6■□□□□ 0.73
ACLYP53396 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.6■□□□□ 0.73
ACLYP53396 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACLYP53396 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ACLYP53396 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.6■□□□□ 0.73
ACLYP53396 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.6■□□□□ 0.73
ACLYP53396 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.6■□□□□ 0.73
ACLYP53396 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.6■□□□□ 0.73
ACLYP53396 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms