Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDX1P52945 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDX1P52945 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.39■□□□□ 0.37
PDX1P52945 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.39■□□□□ 0.37
PDX1P52945 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.39■□□□□ 0.37
PDX1P52945 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
PDX1P52945 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PDX1P52945 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PDX1P52945 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.38■□□□□ 0.37
PDX1P52945 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.38■□□□□ 0.37
PDX1P52945 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.38■□□□□ 0.37
PDX1P52945 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.38■□□□□ 0.37
PDX1P52945 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.38■□□□□ 0.37
PDX1P52945 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.38■□□□□ 0.37
PDX1P52945 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDX1P52945 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PDX1P52945 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.37■□□□□ 0.37
PDX1P52945 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PDX1P52945 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PDX1P52945 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PDX1P52945 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.37■□□□□ 0.37
PDX1P52945 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.37■□□□□ 0.37
PDX1P52945 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
PDX1P52945 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.37■□□□□ 0.37
PDX1P52945 HNRNPDP1-201ENST00000439535 754 ntBASIC17.37■□□□□ 0.37
PDX1P52945 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PDX1P52945 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.37■□□□□ 0.37
PDX1P52945 RNPS1P1-201ENST00000507437 918 ntBASIC17.37■□□□□ 0.37
PDX1P52945 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.37■□□□□ 0.37
PDX1P52945 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.37■□□□□ 0.37
PDX1P52945 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.37■□□□□ 0.37
PDX1P52945 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PDX1P52945 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.37■□□□□ 0.37
PDX1P52945 AC008687.5-201ENST00000593746 558 ntBASIC17.37■□□□□ 0.37
PDX1P52945 FAM215A-202ENST00000632077 792 ntBASIC17.37■□□□□ 0.37
PDX1P52945 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PDX1P52945 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PDX1P52945 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDX1P52945 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
PDX1P52945 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.36■□□□□ 0.37
PDX1P52945 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.36■□□□□ 0.37
PDX1P52945 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.36■□□□□ 0.37
PDX1P52945 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PDX1P52945 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 RBM17P3-201ENST00000417687 1192 ntBASIC17.36■□□□□ 0.37
PDX1P52945 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.36■□□□□ 0.37
PDX1P52945 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.36■□□□□ 0.37
PDX1P52945 KRT18P58-201ENST00000527480 1120 ntBASIC17.36■□□□□ 0.37
PDX1P52945 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.36■□□□□ 0.37
PDX1P52945 AC106730.1-201ENST00000566722 1090 ntBASIC17.36■□□□□ 0.37
PDX1P52945 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.36■□□□□ 0.37
PDX1P52945 AL138831.2-201ENST00000606564 490 ntBASIC17.36■□□□□ 0.37
PDX1P52945 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDX1P52945 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms