Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GPC3P51654 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.75■□□□□ 0.75
GPC3P51654 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC3P51654 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
GPC3P51654 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC3P51654 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GPC3P51654 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.75■□□□□ 0.75
GPC3P51654 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.75■□□□□ 0.75
GPC3P51654 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.75■□□□□ 0.75
GPC3P51654 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC3P51654 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GPC3P51654 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
GPC3P51654 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.74■□□□□ 0.75
GPC3P51654 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.74■□□□□ 0.75
GPC3P51654 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
GPC3P51654 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.74■□□□□ 0.75
GPC3P51654 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.74■□□□□ 0.75
GPC3P51654 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC3P51654 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
GPC3P51654 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.74■□□□□ 0.75
GPC3P51654 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC3P51654 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.74■□□□□ 0.75
GPC3P51654 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC3P51654 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
GPC3P51654 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC3P51654 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
GPC3P51654 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.74■□□□□ 0.75
GPC3P51654 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
GPC3P51654 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.74■□□□□ 0.75
GPC3P51654 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GPC3P51654 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.74■□□□□ 0.75
GPC3P51654 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.74■□□□□ 0.75
GPC3P51654 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.74■□□□□ 0.75
GPC3P51654 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GPC3P51654 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.74■□□□□ 0.75
GPC3P51654 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.74■□□□□ 0.75
GPC3P51654 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.74■□□□□ 0.75
GPC3P51654 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GPC3P51654 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.74■□□□□ 0.75
GPC3P51654 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.74■□□□□ 0.75
GPC3P51654 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.74■□□□□ 0.75
GPC3P51654 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC3P51654 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
GPC3P51654 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC3P51654 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
GPC3P51654 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC3P51654 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.74■□□□□ 0.75
GPC3P51654 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
GPC3P51654 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.73■□□□□ 0.75
GPC3P51654 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
GPC3P51654 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.73■□□□□ 0.75
GPC3P51654 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.73■□□□□ 0.75
GPC3P51654 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 AL662844.1-201ENST00000546340 181 ntBASIC19.73■□□□□ 0.75
GPC3P51654 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.73■□□□□ 0.75
GPC3P51654 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.73■□□□□ 0.75
GPC3P51654 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.73■□□□□ 0.75
GPC3P51654 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
GPC3P51654 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.73■□□□□ 0.75
GPC3P51654 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.73■□□□□ 0.75
GPC3P51654 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
GPC3P51654 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
GPC3P51654 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
GPC3P51654 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC3P51654 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
GPC3P51654 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC3P51654 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GPC3P51654 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GPC3P51654 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GPC3P51654 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GPC3P51654 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.72■□□□□ 0.75
GPC3P51654 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
GPC3P51654 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC3P51654 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.72■□□□□ 0.75
GPC3P51654 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC3P51654 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC3P51654 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.72■□□□□ 0.75
GPC3P51654 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.72■□□□□ 0.75
GPC3P51654 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.72■□□□□ 0.75
GPC3P51654 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.72■□□□□ 0.75
GPC3P51654 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GPC3P51654 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.72■□□□□ 0.75
GPC3P51654 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GPC3P51654 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.72■□□□□ 0.75
GPC3P51654 AC008608.2-201ENST00000606089 416 ntBASIC19.72■□□□□ 0.75
GPC3P51654 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms