Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A12P48065 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC6A12P48065 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A12P48065 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A12P48065 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SLC6A12P48065 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
SLC6A12P48065 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A12P48065 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A12P48065 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A12P48065 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC6A12P48065 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A12P48065 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A12P48065 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A12P48065 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SLC6A12P48065 TSPY22P-201ENST00000427496 604 ntBASIC17.27■□□□□ 0.36
SLC6A12P48065 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A12P48065 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC6A12P48065 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC6A12P48065 AC011498.5-201ENST00000592027 486 ntBASIC17.27■□□□□ 0.36
SLC6A12P48065 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.27■□□□□ 0.36
SLC6A12P48065 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SLC6A12P48065 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A12P48065 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A12P48065 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SLC6A12P48065 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A12P48065 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A12P48065 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A12P48065 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A12P48065 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SLC6A12P48065 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A12P48065 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC6A12P48065 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC6A12P48065 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A12P48065 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC6A12P48065 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A12P48065 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SLC6A12P48065 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A12P48065 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC6A12P48065 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC6A12P48065 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A12P48065 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A12P48065 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A12P48065 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A12P48065 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC6A12P48065 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC6A12P48065 RN7SL606P-201ENST00000472779 293 ntBASIC17.26■□□□□ 0.35
SLC6A12P48065 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A12P48065 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A12P48065 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.26■□□□□ 0.35
SLC6A12P48065 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC6A12P48065 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
SLC6A12P48065 NTF6B-201ENST00000591913 560 ntBASIC17.26■□□□□ 0.35
SLC6A12P48065 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A12P48065 LINC01451-201ENST00000623792 534 ntBASIC17.26■□□□□ 0.35
SLC6A12P48065 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC6A12P48065 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC6A12P48065 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC6A12P48065 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A12P48065 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC6A12P48065 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A12P48065 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A12P48065 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A12P48065 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC6A12P48065 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SLC6A12P48065 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC6A12P48065 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 HLA-J-201ENST00000462773 1622 ntBASIC17.25■□□□□ 0.35
SLC6A12P48065 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SLC6A12P48065 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC6A12P48065 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 AC096633.1-201ENST00000422446 749 ntBASIC17.25■□□□□ 0.35
SLC6A12P48065 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.25■□□□□ 0.35
SLC6A12P48065 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC6A12P48065 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC6A12P48065 AL353801.3-201ENST00000609898 542 ntBASIC17.25■□□□□ 0.35
SLC6A12P48065 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC6A12P48065 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC6A12P48065 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLC6A12P48065 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC6A12P48065 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A12P48065 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC6A12P48065 PP12613-201ENST00000424958 2230 ntBASIC17.24■□□□□ 0.35
SLC6A12P48065 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms