Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRIA1P42261 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GRIA1P42261 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GRIA1P42261 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GRIA1P42261 KRT8P47-201ENST00000604727 1398 ntBASIC18.17■□□□□ 0.5
GRIA1P42261 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GRIA1P42261 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
GRIA1P42261 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.16■□□□□ 0.5
GRIA1P42261 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
GRIA1P42261 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRIA1P42261 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRIA1P42261 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.16■□□□□ 0.5
GRIA1P42261 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.16■□□□□ 0.5
GRIA1P42261 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.16■□□□□ 0.5
GRIA1P42261 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.16■□□□□ 0.5
GRIA1P42261 KRT89P-201ENST00000620027 1478 ntBASIC18.16■□□□□ 0.5
GRIA1P42261 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.16■□□□□ 0.5
GRIA1P42261 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
GRIA1P42261 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRIA1P42261 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRIA1P42261 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.16■□□□□ 0.5
GRIA1P42261 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.16■□□□□ 0.5
GRIA1P42261 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRIA1P42261 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
GRIA1P42261 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.16■□□□□ 0.5
GRIA1P42261 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.16■□□□□ 0.5
GRIA1P42261 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.16■□□□□ 0.5
GRIA1P42261 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.16■□□□□ 0.5
GRIA1P42261 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GRIA1P42261 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.16■□□□□ 0.5
GRIA1P42261 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRIA1P42261 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.16■□□□□ 0.5
GRIA1P42261 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GRIA1P42261 AC022898.2-201ENST00000616822 1312 ntBASIC18.16■□□□□ 0.5
GRIA1P42261 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
GRIA1P42261 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GRIA1P42261 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.16■□□□□ 0.5
GRIA1P42261 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
GRIA1P42261 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.15■□□□□ 0.5
GRIA1P42261 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.15■□□□□ 0.5
GRIA1P42261 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.15■□□□□ 0.5
GRIA1P42261 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.15■□□□□ 0.5
GRIA1P42261 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.15■□□□□ 0.5
GRIA1P42261 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.15■□□□□ 0.5
GRIA1P42261 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.15■□□□□ 0.5
GRIA1P42261 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
GRIA1P42261 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
GRIA1P42261 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 HTR7P1-202ENST00000624664 4411 ntBASIC18.15■□□□□ 0.5
GRIA1P42261 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
GRIA1P42261 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GRIA1P42261 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.14■□□□□ 0.5
GRIA1P42261 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
GRIA1P42261 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 REXO1L11P-201ENST00000620964 1927 ntBASIC18.14■□□□□ 0.49
GRIA1P42261 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.14■□□□□ 0.49
GRIA1P42261 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.14■□□□□ 0.49
GRIA1P42261 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.14■□□□□ 0.49
GRIA1P42261 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.14■□□□□ 0.49
GRIA1P42261 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.14■□□□□ 0.49
GRIA1P42261 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GRIA1P42261 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.14■□□□□ 0.49
GRIA1P42261 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.14■□□□□ 0.49
GRIA1P42261 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.13■□□□□ 0.49
GRIA1P42261 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.13■□□□□ 0.49
GRIA1P42261 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms