Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AC190387.1-201ENST00000551683 408 ntBASIC17.42■□□□□ 0.38
LAMA1P25391 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.42■□□□□ 0.38
LAMA1P25391 AC008687.5-201ENST00000593746 558 ntBASIC17.42■□□□□ 0.38
LAMA1P25391 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMA1P25391 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.42■□□□□ 0.38
LAMA1P25391 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LAMA1P25391 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.42■□□□□ 0.38
LAMA1P25391 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.42■□□□□ 0.38
LAMA1P25391 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LAMA1P25391 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LAMA1P25391 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LAMA1P25391 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LAMA1P25391 AC096633.1-201ENST00000422446 749 ntBASIC17.42■□□□□ 0.38
LAMA1P25391 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.42■□□□□ 0.38
LAMA1P25391 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.42■□□□□ 0.38
LAMA1P25391 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LAMA1P25391 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.42■□□□□ 0.38
LAMA1P25391 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMA1P25391 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LAMA1P25391 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
LAMA1P25391 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.42■□□□□ 0.38
LAMA1P25391 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA1P25391 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMA1P25391 TSEN15P1-201ENST00000423257 515 ntBASIC17.41■□□□□ 0.38
LAMA1P25391 VN2R19P-201ENST00000442399 1052 ntBASIC17.41■□□□□ 0.38
LAMA1P25391 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMA1P25391 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.41■□□□□ 0.38
LAMA1P25391 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMA1P25391 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.41■□□□□ 0.38
LAMA1P25391 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LAMA1P25391 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LAMA1P25391 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LAMA1P25391 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA1P25391 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMA1P25391 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA1P25391 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA1P25391 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA1P25391 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMA1P25391 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LAMA1P25391 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA1P25391 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.41■□□□□ 0.38
LAMA1P25391 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA1P25391 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA1P25391 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA1P25391 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA1P25391 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMA1P25391 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.41■□□□□ 0.38
LAMA1P25391 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
LAMA1P25391 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
LAMA1P25391 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.41■□□□□ 0.38
LAMA1P25391 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA1P25391 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
LAMA1P25391 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA1P25391 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA1P25391 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA1P25391 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA1P25391 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.4■□□□□ 0.38
LAMA1P25391 AC239800.4-201ENST00000603712 296 ntBASIC17.4■□□□□ 0.38
LAMA1P25391 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA1P25391 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA1P25391 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.4■□□□□ 0.38
LAMA1P25391 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA1P25391 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LAMA1P25391 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
LAMA1P25391 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA1P25391 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA1P25391 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA1P25391 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.4■□□□□ 0.38
LAMA1P25391 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.4■□□□□ 0.38
LAMA1P25391 AC011467.4-201ENST00000594891 528 ntBASIC17.4■□□□□ 0.38
LAMA1P25391 AD001527.2-201ENST00000622994 785 ntBASIC17.4■□□□□ 0.38
LAMA1P25391 SLC25A24-204ENST00000569674 2357 ntBASIC17.4■□□□□ 0.38
LAMA1P25391 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA1P25391 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA1P25391 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.4■□□□□ 0.38
LAMA1P25391 NCF1C-201ENST00000438382 1427 ntBASIC17.4■□□□□ 0.38
LAMA1P25391 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA1P25391 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.39■□□□□ 0.38
LAMA1P25391 AL589182.2-201ENST00000619332 1049 ntBASIC17.39■□□□□ 0.38
LAMA1P25391 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.39■□□□□ 0.38
LAMA1P25391 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA1P25391 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA1P25391 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA1P25391 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.39■□□□□ 0.37
LAMA1P25391 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LAMA1P25391 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA1P25391 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA1P25391 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
LAMA1P25391 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA1P25391 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
LAMA1P25391 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.39■□□□□ 0.37
LAMA1P25391 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.39■□□□□ 0.37
LAMA1P25391 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.39■□□□□ 0.37
LAMA1P25391 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.39■□□□□ 0.37
LAMA1P25391 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA1P25391 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA1P25391 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA1P25391 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.39■□□□□ 0.37
LAMA1P25391 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA1P25391 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms