Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX1P22670 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX1P22670 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFX1P22670 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RFX1P22670 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX1P22670 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.51■□□□□ 0.71
RFX1P22670 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.51■□□□□ 0.71
RFX1P22670 RASA4DP-201ENST00000460726 1199 ntBASIC19.51■□□□□ 0.71
RFX1P22670 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFX1P22670 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.51■□□□□ 0.71
RFX1P22670 IFNL4P1-201ENST00000607083 540 ntBASIC19.51■□□□□ 0.71
RFX1P22670 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.51■□□□□ 0.71
RFX1P22670 AL157888.1-201ENST00000631930 593 ntBASIC19.51■□□□□ 0.71
RFX1P22670 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RFX1P22670 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RFX1P22670 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.51■□□□□ 0.71
RFX1P22670 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX1P22670 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX1P22670 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX1P22670 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFX1P22670 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.5■□□□□ 0.71
RFX1P22670 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
RFX1P22670 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.5■□□□□ 0.71
RFX1P22670 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFX1P22670 AC132938.6-201ENST00000623828 1655 ntBASIC19.5■□□□□ 0.71
RFX1P22670 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX1P22670 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX1P22670 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RFX1P22670 KRT89P-201ENST00000620027 1478 ntBASIC19.5■□□□□ 0.71
RFX1P22670 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX1P22670 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFX1P22670 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.5■□□□□ 0.71
RFX1P22670 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.5■□□□□ 0.71
RFX1P22670 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX1P22670 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.5■□□□□ 0.71
RFX1P22670 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
RFX1P22670 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.5■□□□□ 0.71
RFX1P22670 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFX1P22670 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFX1P22670 PCDHB18P-201ENST00000524813 2368 ntBASIC19.5■□□□□ 0.71
RFX1P22670 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX1P22670 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX1P22670 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX1P22670 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX1P22670 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFX1P22670 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RFX1P22670 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.5■□□□□ 0.71
RFX1P22670 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.49■□□□□ 0.71
RFX1P22670 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RFX1P22670 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 AC006116.8-202ENST00000587620 1550 ntBASIC19.49■□□□□ 0.71
RFX1P22670 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.49■□□□□ 0.71
RFX1P22670 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFX1P22670 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.49■□□□□ 0.71
RFX1P22670 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RFX1P22670 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.49■□□□□ 0.71
RFX1P22670 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.49■□□□□ 0.71
RFX1P22670 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.49■□□□□ 0.71
RFX1P22670 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.49■□□□□ 0.71
RFX1P22670 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RFX1P22670 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFX1P22670 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RFX1P22670 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RFX1P22670 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFX1P22670 AC022898.2-201ENST00000616822 1312 ntBASIC19.49■□□□□ 0.71
RFX1P22670 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.49■□□□□ 0.71
RFX1P22670 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.49■□□□□ 0.71
RFX1P22670 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFX1P22670 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.48■□□□□ 0.71
RFX1P22670 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RFX1P22670 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX1P22670 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX1P22670 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX1P22670 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.48■□□□□ 0.71
RFX1P22670 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX1P22670 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
RFX1P22670 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFX1P22670 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RFX1P22670 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RFX1P22670 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFX1P22670 AC092597.1-201ENST00000487352 616 ntBASIC19.48■□□□□ 0.71
RFX1P22670 UNC93B7-201ENST00000509439 705 ntBASIC19.48■□□□□ 0.71
RFX1P22670 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.48■□□□□ 0.71
RFX1P22670 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.48■□□□□ 0.71
RFX1P22670 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms