Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.81■■□□□ 1.08
KCNA3P22001 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KCNA3P22001 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KCNA3P22001 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
KCNA3P22001 MIR661-201ENST00000384842 89 ntBASIC21.81■■□□□ 1.08
KCNA3P22001 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.81■■□□□ 1.08
KCNA3P22001 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.81■■□□□ 1.08
KCNA3P22001 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.81■■□□□ 1.08
KCNA3P22001 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.81■■□□□ 1.08
KCNA3P22001 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.81■■□□□ 1.08
KCNA3P22001 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.81■■□□□ 1.08
KCNA3P22001 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
KCNA3P22001 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KCNA3P22001 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.81■■□□□ 1.08
KCNA3P22001 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
KCNA3P22001 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.81■■□□□ 1.08
KCNA3P22001 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KCNA3P22001 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.8■■□□□ 1.08
KCNA3P22001 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
KCNA3P22001 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KCNA3P22001 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
KCNA3P22001 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KCNA3P22001 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
KCNA3P22001 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KCNA3P22001 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.8■■□□□ 1.08
KCNA3P22001 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
KCNA3P22001 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.8■■□□□ 1.08
KCNA3P22001 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
KCNA3P22001 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KCNA3P22001 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
KCNA3P22001 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.8■■□□□ 1.08
KCNA3P22001 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
KCNA3P22001 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.8■■□□□ 1.08
KCNA3P22001 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.8■■□□□ 1.08
KCNA3P22001 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
KCNA3P22001 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.8■■□□□ 1.08
KCNA3P22001 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.8■■□□□ 1.08
KCNA3P22001 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.8■■□□□ 1.08
KCNA3P22001 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KCNA3P22001 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.8■■□□□ 1.08
KCNA3P22001 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.8■■□□□ 1.08
KCNA3P22001 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.8■■□□□ 1.08
KCNA3P22001 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KCNA3P22001 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.8■■□□□ 1.08
KCNA3P22001 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KCNA3P22001 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
KCNA3P22001 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.79■■□□□ 1.08
KCNA3P22001 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.79■■□□□ 1.08
KCNA3P22001 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.79■■□□□ 1.08
KCNA3P22001 RNA5SP421-201ENST00000516864 134 ntBASIC21.79■■□□□ 1.08
KCNA3P22001 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.79■■□□□ 1.08
KCNA3P22001 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.79■■□□□ 1.08
KCNA3P22001 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.79■■□□□ 1.08
KCNA3P22001 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.79■■□□□ 1.08
KCNA3P22001 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.79■■□□□ 1.08
KCNA3P22001 AC007064.4-201ENST00000637740 555 ntBASIC21.79■■□□□ 1.08
KCNA3P22001 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.79■■□□□ 1.08
KCNA3P22001 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.79■■□□□ 1.08
KCNA3P22001 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KCNA3P22001 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.79■■□□□ 1.08
KCNA3P22001 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNA3P22001 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.78■■□□□ 1.08
KCNA3P22001 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
KCNA3P22001 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.78■■□□□ 1.08
KCNA3P22001 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNA3P22001 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNA3P22001 GK-202ENST00000378941 458 ntTSL 3 BASIC21.78■■□□□ 1.08
KCNA3P22001 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
KCNA3P22001 AP002414.1-201ENST00000391405 1147 ntBASIC21.78■■□□□ 1.08
KCNA3P22001 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.78■■□□□ 1.08
KCNA3P22001 ADH5P3-201ENST00000433842 1137 ntBASIC21.78■■□□□ 1.08
KCNA3P22001 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.78■■□□□ 1.08
KCNA3P22001 FAM86GP-201ENST00000448322 971 ntBASIC21.78■■□□□ 1.08
KCNA3P22001 SIGLEC30P-201ENST00000455569 941 ntBASIC21.78■■□□□ 1.08
KCNA3P22001 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.78■■□□□ 1.08
KCNA3P22001 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.78■■□□□ 1.08
KCNA3P22001 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.78■■□□□ 1.08
KCNA3P22001 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.78■■□□□ 1.08
KCNA3P22001 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.78■■□□□ 1.08
KCNA3P22001 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
KCNA3P22001 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNA3P22001 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNA3P22001 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
KCNA3P22001 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
KCNA3P22001 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.78■■□□□ 1.08
KCNA3P22001 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms