Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMPD1P17405 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMPD1P17405 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMPD1P17405 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SMPD1P17405 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMPD1P17405 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMPD1P17405 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.83■□□□□ 0.77
SMPD1P17405 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMPD1P17405 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMPD1P17405 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMPD1P17405 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMPD1P17405 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMPD1P17405 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.83■□□□□ 0.77
SMPD1P17405 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SMPD1P17405 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.83■□□□□ 0.77
SMPD1P17405 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.83■□□□□ 0.77
SMPD1P17405 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SMPD1P17405 ELK2BP-201ENST00000415014 1224 ntBASIC19.83■□□□□ 0.77
SMPD1P17405 AC004967.1-201ENST00000453589 447 ntBASIC19.83■□□□□ 0.77
SMPD1P17405 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.83■□□□□ 0.77
SMPD1P17405 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMPD1P17405 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SMPD1P17405 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.83■□□□□ 0.77
SMPD1P17405 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.83■□□□□ 0.77
SMPD1P17405 AC134684.3-201ENST00000641758 218 ntBASIC19.83■□□□□ 0.77
SMPD1P17405 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMPD1P17405 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMPD1P17405 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMPD1P17405 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMPD1P17405 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMPD1P17405 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMPD1P17405 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMPD1P17405 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMPD1P17405 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMPD1P17405 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.83■□□□□ 0.76
SMPD1P17405 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMPD1P17405 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SMPD1P17405 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SMPD1P17405 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD1P17405 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD1P17405 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD1P17405 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SMPD1P17405 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD1P17405 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.82■□□□□ 0.76
SMPD1P17405 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD1P17405 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD1P17405 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD1P17405 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD1P17405 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD1P17405 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.82■□□□□ 0.76
SMPD1P17405 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.82■□□□□ 0.76
SMPD1P17405 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.82■□□□□ 0.76
SMPD1P17405 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.82■□□□□ 0.76
SMPD1P17405 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SMPD1P17405 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.82■□□□□ 0.76
SMPD1P17405 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.82■□□□□ 0.76
SMPD1P17405 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
SMPD1P17405 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
SMPD1P17405 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.82■□□□□ 0.76
SMPD1P17405 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD1P17405 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD1P17405 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.82■□□□□ 0.76
SMPD1P17405 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD1P17405 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.82■□□□□ 0.76
SMPD1P17405 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD1P17405 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.82■□□□□ 0.76
SMPD1P17405 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMPD1P17405 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD1P17405 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.81■□□□□ 0.76
SMPD1P17405 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD1P17405 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SMPD1P17405 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD1P17405 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.81■□□□□ 0.76
SMPD1P17405 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD1P17405 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD1P17405 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD1P17405 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD1P17405 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.81■□□□□ 0.76
SMPD1P17405 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SMPD1P17405 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.81■□□□□ 0.76
SMPD1P17405 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD1P17405 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SMPD1P17405 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD1P17405 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.81■□□□□ 0.76
SMPD1P17405 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD1P17405 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD1P17405 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD1P17405 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SMPD1P17405 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.81■□□□□ 0.76
SMPD1P17405 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SMPD1P17405 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.81■□□□□ 0.76
SMPD1P17405 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMPD1P17405 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.8■□□□□ 0.76
SMPD1P17405 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SMPD1P17405 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SMPD1P17405 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.8■□□□□ 0.76
SMPD1P17405 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.8■□□□□ 0.76
SMPD1P17405 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms