Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD8P13378 AL138781.2-201ENST00000617896 1843 ntBASIC19.65■□□□□ 0.74
HOXD8P13378 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
HOXD8P13378 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
HOXD8P13378 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXD8P13378 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HOXD8P13378 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD8P13378 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD8P13378 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.64■□□□□ 0.73
HOXD8P13378 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 KLF4P1-201ENST00000412782 1185 ntBASIC19.64■□□□□ 0.73
HOXD8P13378 ELK2BP-201ENST00000415014 1224 ntBASIC19.64■□□□□ 0.73
HOXD8P13378 AC004832.2-201ENST00000426397 482 ntBASIC19.64■□□□□ 0.73
HOXD8P13378 AC005104.2-201ENST00000427818 678 ntBASIC19.64■□□□□ 0.73
HOXD8P13378 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HOXD8P13378 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXD8P13378 STK25P1-201ENST00000585406 838 ntBASIC19.64■□□□□ 0.73
HOXD8P13378 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HOXD8P13378 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 AC116407.2-201ENST00000613639 860 ntBASIC19.64■□□□□ 0.73
HOXD8P13378 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.64■□□□□ 0.73
HOXD8P13378 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXD8P13378 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HOXD8P13378 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXD8P13378 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HOXD8P13378 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HOXD8P13378 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HOXD8P13378 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXD8P13378 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD8P13378 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD8P13378 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD8P13378 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.63■□□□□ 0.73
HOXD8P13378 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXD8P13378 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXD8P13378 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD8P13378 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD8P13378 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD8P13378 BX276092.7-203ENST00000637198 1536 ntBASIC19.63■□□□□ 0.73
HOXD8P13378 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD8P13378 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HOXD8P13378 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD8P13378 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD8P13378 YBX2P1-201ENST00000394192 760 ntBASIC19.63■□□□□ 0.73
HOXD8P13378 RPSAP43-201ENST00000402237 625 ntBASIC19.63■□□□□ 0.73
HOXD8P13378 UPF3AP3-201ENST00000420996 769 ntBASIC19.63■□□□□ 0.73
HOXD8P13378 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HOXD8P13378 RNA5SP416-201ENST00000516838 111 ntBASIC19.63■□□□□ 0.73
HOXD8P13378 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXD8P13378 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXD8P13378 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXD8P13378 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXD8P13378 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD8P13378 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD8P13378 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD8P13378 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD8P13378 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD8P13378 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXD8P13378 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD8P13378 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD8P13378 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD8P13378 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXD8P13378 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HOXD8P13378 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD8P13378 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXD8P13378 AC006504.4-201ENST00000592118 1568 ntBASIC19.62■□□□□ 0.73
HOXD8P13378 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD8P13378 NCF1C-201ENST00000438382 1427 ntBASIC19.62■□□□□ 0.73
HOXD8P13378 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXD8P13378 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HOXD8P13378 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD8P13378 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD8P13378 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HOXD8P13378 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.62■□□□□ 0.73
HOXD8P13378 GPX1P2-201ENST00000429271 606 ntBASIC19.62■□□□□ 0.73
HOXD8P13378 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.62■□□□□ 0.73
HOXD8P13378 AC108751.1-201ENST00000490852 363 ntBASIC19.62■□□□□ 0.73
HOXD8P13378 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.62■□□□□ 0.73
HOXD8P13378 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXD8P13378 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXD8P13378 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HOXD8P13378 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXD8P13378 AC009949.1-201ENST00000623048 1830 ntBASIC19.62■□□□□ 0.73
HOXD8P13378 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXD8P13378 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXD8P13378 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD8P13378 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD8P13378 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms