Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC112482.1-201ENST00000492080 688 ntBASIC16.84■□□□□ 0.29
CCL4P13236 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
CCL4P13236 AC022898.2-201ENST00000616822 1312 ntBASIC16.84■□□□□ 0.29
CCL4P13236 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL4P13236 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
CCL4P13236 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL4P13236 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL4P13236 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.84■□□□□ 0.29
CCL4P13236 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL4P13236 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCL4P13236 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCL4P13236 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCL4P13236 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCL4P13236 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCL4P13236 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCL4P13236 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL4P13236 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCL4P13236 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.83■□□□□ 0.28
CCL4P13236 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCL4P13236 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.83■□□□□ 0.28
CCL4P13236 AC023274.1-201ENST00000418278 595 ntBASIC16.83■□□□□ 0.28
CCL4P13236 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.83■□□□□ 0.28
CCL4P13236 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.83■□□□□ 0.28
CCL4P13236 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.83■□□□□ 0.28
CCL4P13236 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CCL4P13236 DUTP2-201ENST00000519164 463 ntBASIC16.83■□□□□ 0.28
CCL4P13236 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.83■□□□□ 0.28
CCL4P13236 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL4P13236 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL4P13236 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.83■□□□□ 0.28
CCL4P13236 AC006557.2-201ENST00000592985 1240 ntBASIC16.83■□□□□ 0.28
CCL4P13236 SIGLEC16-201ENST00000599858 1437 ntBASIC16.83■□□□□ 0.28
CCL4P13236 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.83■□□□□ 0.28
CCL4P13236 AC005593.1-201ENST00000624894 515 ntBASIC16.83■□□□□ 0.28
CCL4P13236 AC073592.3-201ENST00000625118 1834 ntBASIC16.83■□□□□ 0.28
CCL4P13236 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL4P13236 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCL4P13236 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL4P13236 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCL4P13236 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL4P13236 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL4P13236 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL4P13236 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCL4P13236 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL4P13236 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL4P13236 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCL4P13236 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL4P13236 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL4P13236 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL4P13236 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL4P13236 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL4P13236 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.82■□□□□ 0.28
CCL4P13236 RPS8P6-201ENST00000426177 609 ntBASIC16.82■□□□□ 0.28
CCL4P13236 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.82■□□□□ 0.28
CCL4P13236 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL4P13236 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.82■□□□□ 0.28
CCL4P13236 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.82■□□□□ 0.28
CCL4P13236 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL4P13236 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL4P13236 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.82■□□□□ 0.28
CCL4P13236 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.82■□□□□ 0.28
CCL4P13236 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.82■□□□□ 0.28
CCL4P13236 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL4P13236 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL4P13236 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL4P13236 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CCL4P13236 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL4P13236 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCL4P13236 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CCL4P13236 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL4P13236 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL4P13236 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CCL4P13236 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL4P13236 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL4P13236 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL4P13236 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL4P13236 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.81■□□□□ 0.28
CCL4P13236 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCL4P13236 AC108751.1-201ENST00000490852 363 ntBASIC16.81■□□□□ 0.28
CCL4P13236 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCL4P13236 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.81■□□□□ 0.28
CCL4P13236 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.81■□□□□ 0.28
CCL4P13236 MIR3687-2-201ENST00000577708 61 ntBASIC16.81■□□□□ 0.28
CCL4P13236 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCL4P13236 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.81■□□□□ 0.28
CCL4P13236 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.81■□□□□ 0.28
CCL4P13236 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.81■□□□□ 0.28
CCL4P13236 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms