Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.73■□□□□ 0.11
UBCP0CG48 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
UBCP0CG48 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.73■□□□□ 0.11
UBCP0CG48 AL645608.8-201ENST00000606034 2086 ntBASIC15.73■□□□□ 0.11
UBCP0CG48 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.73■□□□□ 0.11
UBCP0CG48 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.73■□□□□ 0.11
UBCP0CG48 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.73■□□□□ 0.11
UBCP0CG48 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.73■□□□□ 0.11
UBCP0CG48 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.73■□□□□ 0.11
UBCP0CG48 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
UBCP0CG48 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
UBCP0CG48 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
UBCP0CG48 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.73■□□□□ 0.11
UBCP0CG48 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.73■□□□□ 0.11
UBCP0CG48 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.73■□□□□ 0.11
UBCP0CG48 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBCP0CG48 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
UBCP0CG48 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.72■□□□□ 0.11
UBCP0CG48 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.72■□□□□ 0.11
UBCP0CG48 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
UBCP0CG48 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
UBCP0CG48 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
UBCP0CG48 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
UBCP0CG48 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.72■□□□□ 0.11
UBCP0CG48 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
UBCP0CG48 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 TSPY14P-201ENST00000303979 915 ntBASIC15.72■□□□□ 0.11
UBCP0CG48 MIR1238-201ENST00000408483 83 ntBASIC15.72■□□□□ 0.11
UBCP0CG48 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 AL390955.1-201ENST00000428694 934 ntBASIC15.72■□□□□ 0.11
UBCP0CG48 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.72■□□□□ 0.11
UBCP0CG48 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.72■□□□□ 0.11
UBCP0CG48 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.72■□□□□ 0.11
UBCP0CG48 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.72■□□□□ 0.11
UBCP0CG48 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
UBCP0CG48 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.72■□□□□ 0.11
UBCP0CG48 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.72■□□□□ 0.11
UBCP0CG48 AL512604.3-201ENST00000569583 964 ntBASIC15.72■□□□□ 0.11
UBCP0CG48 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.72■□□□□ 0.11
UBCP0CG48 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.72■□□□□ 0.11
UBCP0CG48 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.72■□□□□ 0.11
UBCP0CG48 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
UBCP0CG48 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBCP0CG48 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.71■□□□□ 0.11
UBCP0CG48 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
UBCP0CG48 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.71■□□□□ 0.11
UBCP0CG48 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
UBCP0CG48 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
UBCP0CG48 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.71■□□□□ 0.11
UBCP0CG48 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
UBCP0CG48 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.71■□□□□ 0.11
UBCP0CG48 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 AC132938.6-201ENST00000623828 1655 ntBASIC15.71■□□□□ 0.11
UBCP0CG48 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
UBCP0CG48 TSPY7P-201ENST00000431358 1114 ntBASIC15.71■□□□□ 0.11
UBCP0CG48 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 AC128688.1-201ENST00000487626 519 ntBASIC15.71■□□□□ 0.11
UBCP0CG48 AC008550.1-201ENST00000511500 884 ntBASIC15.71■□□□□ 0.11
UBCP0CG48 EGLN1P1-201ENST00000531623 762 ntBASIC15.71■□□□□ 0.11
UBCP0CG48 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.71■□□□□ 0.11
UBCP0CG48 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.71■□□□□ 0.11
UBCP0CG48 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms