Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST1H2ABP04908 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HIST1H2ABP04908 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 AC139713.2-201ENST00000641328 2723 ntBASIC16.36■□□□□ 0.21
HIST1H2ABP04908 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 PRORSD1P-202ENST00000563365 2154 ntBASIC16.36■□□□□ 0.21
HIST1H2ABP04908 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 AL031432.5-201ENST00000641059 760 ntBASIC16.36■□□□□ 0.21
HIST1H2ABP04908 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIST1H2ABP04908 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 PVRIG2P-201ENST00000435460 978 ntBASIC16.35■□□□□ 0.21
HIST1H2ABP04908 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.35■□□□□ 0.21
HIST1H2ABP04908 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 AC022898.2-201ENST00000616822 1312 ntBASIC16.35■□□□□ 0.21
HIST1H2ABP04908 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 AC067852.2-201ENST00000590513 2313 ntBASIC16.35■□□□□ 0.21
HIST1H2ABP04908 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIST1H2ABP04908 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 SLC25A3P1-201ENST00000443844 931 ntBASIC16.34■□□□□ 0.21
HIST1H2ABP04908 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 AL157888.1-201ENST00000631930 593 ntBASIC16.34■□□□□ 0.21
HIST1H2ABP04908 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST1H2ABP04908 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms