Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TCRAP04437 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TCRAP04437 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
TCRAP04437 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TCRAP04437 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 MESTP1-201ENST00000404287 994 ntBASIC13.65□□□□□ -0.22
TCRAP04437 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.65□□□□□ -0.22
TCRAP04437 MFAP1P1-201ENST00000442257 1255 ntBASIC13.65□□□□□ -0.22
TCRAP04437 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.65□□□□□ -0.22
TCRAP04437 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.65□□□□□ -0.22
TCRAP04437 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.65□□□□□ -0.22
TCRAP04437 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.65□□□□□ -0.22
TCRAP04437 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.65□□□□□ -0.22
TCRAP04437 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.65□□□□□ -0.22
TCRAP04437 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
TCRAP04437 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TCRAP04437 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.65□□□□□ -0.22
TCRAP04437 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 LINC00304-203ENST00000565008 1864 ntBASIC13.65□□□□□ -0.22
TCRAP04437 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
TCRAP04437 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TCRAP04437 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
TCRAP04437 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 HLA-J-201ENST00000462773 1622 ntBASIC13.64□□□□□ -0.23
TCRAP04437 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.64□□□□□ -0.23
TCRAP04437 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.64□□□□□ -0.23
TCRAP04437 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.64□□□□□ -0.23
TCRAP04437 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TCRAP04437 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.64□□□□□ -0.23
TCRAP04437 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
TCRAP04437 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.64□□□□□ -0.23
TCRAP04437 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TCRAP04437 AL355802.2-201ENST00000402069 882 ntBASIC13.64□□□□□ -0.23
TCRAP04437 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.64□□□□□ -0.23
TCRAP04437 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TCRAP04437 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.64□□□□□ -0.23
TCRAP04437 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.64□□□□□ -0.23
TCRAP04437 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.64□□□□□ -0.23
TCRAP04437 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.64□□□□□ -0.23
TCRAP04437 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.64□□□□□ -0.23
TCRAP04437 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TCRAP04437 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TCRAP04437 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.64□□□□□ -0.23
TCRAP04437 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.64□□□□□ -0.23
TCRAP04437 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TCRAP04437 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRAP04437 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.64□□□□□ -0.23
TCRAP04437 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TCRAP04437 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TCRAP04437 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.63□□□□□ -0.23
TCRAP04437 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TCRAP04437 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRAP04437 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TCRAP04437 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRAP04437 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.63□□□□□ -0.23
TCRAP04437 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRAP04437 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRAP04437 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TCRAP04437 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.63□□□□□ -0.23
TCRAP04437 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRAP04437 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.63□□□□□ -0.23
TCRAP04437 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.63□□□□□ -0.23
TCRAP04437 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRAP04437 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRAP04437 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRAP04437 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.63□□□□□ -0.23
TCRAP04437 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TCRAP04437 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms