Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.75■□□□□ 0.27
PDGFAP04085 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.75■□□□□ 0.27
PDGFAP04085 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PDGFAP04085 AC005336.2-201ENST00000593183 939 ntBASIC16.75■□□□□ 0.27
PDGFAP04085 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.75■□□□□ 0.27
PDGFAP04085 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.75■□□□□ 0.27
PDGFAP04085 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PDGFAP04085 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PDGFAP04085 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.75■□□□□ 0.27
PDGFAP04085 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFAP04085 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PDGFAP04085 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
PDGFAP04085 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 AC104581.1-202ENST00000635932 2618 ntBASIC16.74■□□□□ 0.27
PDGFAP04085 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PDGFAP04085 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PDGFAP04085 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.74■□□□□ 0.27
PDGFAP04085 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.74■□□□□ 0.27
PDGFAP04085 AC093909.1-201ENST00000504731 1122 ntBASIC16.74■□□□□ 0.27
PDGFAP04085 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.74■□□□□ 0.27
PDGFAP04085 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.74■□□□□ 0.27
PDGFAP04085 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.74■□□□□ 0.27
PDGFAP04085 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PDGFAP04085 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.74■□□□□ 0.27
PDGFAP04085 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
PDGFAP04085 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.74■□□□□ 0.27
PDGFAP04085 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
PDGFAP04085 FAM215A-202ENST00000632077 792 ntBASIC16.74■□□□□ 0.27
PDGFAP04085 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.74■□□□□ 0.27
PDGFAP04085 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.74■□□□□ 0.27
PDGFAP04085 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
PDGFAP04085 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFAP04085 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.73■□□□□ 0.27
PDGFAP04085 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PDGFAP04085 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFAP04085 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PDGFAP04085 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
PDGFAP04085 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PDGFAP04085 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PDGFAP04085 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFAP04085 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.73■□□□□ 0.27
PDGFAP04085 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFAP04085 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PDGFAP04085 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFAP04085 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.73■□□□□ 0.27
PDGFAP04085 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PDGFAP04085 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFAP04085 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFAP04085 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
PDGFAP04085 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.73■□□□□ 0.27
PDGFAP04085 FGFR3P6-201ENST00000457012 610 ntBASIC16.73■□□□□ 0.27
PDGFAP04085 AC092183.1-201ENST00000469884 875 ntBASIC16.73■□□□□ 0.27
PDGFAP04085 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFAP04085 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFAP04085 AC073648.2-201ENST00000510116 352 ntBASIC16.73■□□□□ 0.27
PDGFAP04085 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFAP04085 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PDGFAP04085 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFAP04085 AC139887.3-201ENST00000568585 713 ntBASIC16.73■□□□□ 0.27
PDGFAP04085 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.73■□□□□ 0.27
PDGFAP04085 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
PDGFAP04085 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFAP04085 TERC-201ENST00000602385 541 ntBASIC16.73■□□□□ 0.27
PDGFAP04085 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFAP04085 AL355877.3-201ENST00000622820 899 ntBASIC16.73■□□□□ 0.27
PDGFAP04085 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFAP04085 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.73■□□□□ 0.27
PDGFAP04085 AL163051.1-201ENST00000569214 1512 ntBASIC16.73■□□□□ 0.27
PDGFAP04085 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFAP04085 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFAP04085 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFAP04085 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFAP04085 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFAP04085 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFAP04085 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PDGFAP04085 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PDGFAP04085 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFAP04085 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFAP04085 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PDGFAP04085 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFAP04085 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms