Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.93■□□□□ 0.3
MT-ND1P03886 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-ND1P03886 AC096733.2-201ENST00000609937 1394 ntBASIC16.93■□□□□ 0.3
MT-ND1P03886 LINC01126-201ENST00000623515 1646 ntBASIC16.93■□□□□ 0.3
MT-ND1P03886 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.93■□□□□ 0.3
MT-ND1P03886 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.93■□□□□ 0.3
MT-ND1P03886 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 PRORSD1P-201ENST00000295112 541 ntBASIC16.93■□□□□ 0.3
MT-ND1P03886 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-ND1P03886 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.93■□□□□ 0.3
MT-ND1P03886 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.93■□□□□ 0.3
MT-ND1P03886 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.93■□□□□ 0.3
MT-ND1P03886 DGCR10-201ENST00000609839 495 ntBASIC16.93■□□□□ 0.3
MT-ND1P03886 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
MT-ND1P03886 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MT-ND1P03886 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-ND1P03886 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-ND1P03886 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MT-ND1P03886 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.93■□□□□ 0.3
MT-ND1P03886 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
MT-ND1P03886 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
MT-ND1P03886 AC100803.2-201ENST00000562459 1963 ntBASIC16.93■□□□□ 0.3
MT-ND1P03886 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
MT-ND1P03886 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND1P03886 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.93■□□□□ 0.3
MT-ND1P03886 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND1P03886 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.92■□□□□ 0.3
MT-ND1P03886 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MT-ND1P03886 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND1P03886 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.92■□□□□ 0.3
MT-ND1P03886 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND1P03886 AL163051.1-201ENST00000569214 1512 ntBASIC16.92■□□□□ 0.3
MT-ND1P03886 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.92■□□□□ 0.3
MT-ND1P03886 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND1P03886 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND1P03886 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND1P03886 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND1P03886 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND1P03886 AC116562.2-201ENST00000507042 360 ntBASIC16.92■□□□□ 0.3
MT-ND1P03886 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.92■□□□□ 0.3
MT-ND1P03886 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.92■□□□□ 0.3
MT-ND1P03886 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
MT-ND1P03886 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND1P03886 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
MT-ND1P03886 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
MT-ND1P03886 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND1P03886 AL118508.1-201ENST00000613502 2345 ntBASIC16.92■□□□□ 0.3
MT-ND1P03886 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND1P03886 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND1P03886 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND1P03886 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND1P03886 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.92■□□□□ 0.3
MT-ND1P03886 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MT-ND1P03886 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.91■□□□□ 0.3
MT-ND1P03886 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.91■□□□□ 0.3
MT-ND1P03886 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MT-ND1P03886 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.91■□□□□ 0.3
MT-ND1P03886 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.91■□□□□ 0.3
MT-ND1P03886 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.91■□□□□ 0.3
MT-ND1P03886 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.91■□□□□ 0.3
MT-ND1P03886 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 UBE2SP1-201ENST00000450587 669 ntBASIC16.91■□□□□ 0.3
MT-ND1P03886 NUDT16P1-203ENST00000513809 620 ntBASIC16.91■□□□□ 0.3
MT-ND1P03886 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.91■□□□□ 0.3
MT-ND1P03886 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.91■□□□□ 0.3
MT-ND1P03886 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
MT-ND1P03886 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.91■□□□□ 0.3
MT-ND1P03886 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
MT-ND1P03886 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
MT-ND1P03886 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND1P03886 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
MT-ND1P03886 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.91■□□□□ 0.3
MT-ND1P03886 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MT-ND1P03886 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms