Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA1P02708 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA1P02708 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA1P02708 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA1P02708 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA1P02708 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRNA1P02708 GPX1P2-201ENST00000429271 606 ntBASIC19.39■□□□□ 0.69
CHRNA1P02708 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.39■□□□□ 0.69
CHRNA1P02708 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRNA1P02708 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.39■□□□□ 0.69
CHRNA1P02708 AC112482.1-201ENST00000492080 688 ntBASIC19.39■□□□□ 0.69
CHRNA1P02708 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.39■□□□□ 0.69
CHRNA1P02708 RNA5SP416-201ENST00000516838 111 ntBASIC19.39■□□□□ 0.69
CHRNA1P02708 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.39■□□□□ 0.69
CHRNA1P02708 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CHRNA1P02708 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.39■□□□□ 0.69
CHRNA1P02708 AL691403.2-201ENST00000618460 490 ntBASIC19.39■□□□□ 0.69
CHRNA1P02708 MIR1199-201ENST00000621445 119 ntBASIC19.39■□□□□ 0.69
CHRNA1P02708 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA1P02708 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA1P02708 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA1P02708 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA1P02708 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA1P02708 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRNA1P02708 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA1P02708 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHRNA1P02708 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA1P02708 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CHRNA1P02708 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA1P02708 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA1P02708 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA1P02708 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CHRNA1P02708 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CHRNA1P02708 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA1P02708 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.38■□□□□ 0.69
CHRNA1P02708 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.38■□□□□ 0.69
CHRNA1P02708 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.38■□□□□ 0.69
CHRNA1P02708 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.38■□□□□ 0.69
CHRNA1P02708 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CHRNA1P02708 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA1P02708 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.38■□□□□ 0.69
CHRNA1P02708 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA1P02708 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.38■□□□□ 0.69
CHRNA1P02708 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.38■□□□□ 0.69
CHRNA1P02708 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CHRNA1P02708 AC093677.2-201ENST00000600169 1863 ntBASIC19.38■□□□□ 0.69
CHRNA1P02708 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.38■□□□□ 0.69
CHRNA1P02708 AC005593.1-201ENST00000624894 515 ntBASIC19.38■□□□□ 0.69
CHRNA1P02708 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CHRNA1P02708 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.37■□□□□ 0.69
CHRNA1P02708 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 AC148477.5-201ENST00000625164 1645 ntBASIC19.37■□□□□ 0.69
CHRNA1P02708 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.37■□□□□ 0.69
CHRNA1P02708 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.37■□□□□ 0.69
CHRNA1P02708 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CHRNA1P02708 AL020989.1-201ENST00000422979 469 ntBASIC19.37■□□□□ 0.69
CHRNA1P02708 AC136632.2-201ENST00000512891 861 ntBASIC19.37■□□□□ 0.69
CHRNA1P02708 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.37■□□□□ 0.69
CHRNA1P02708 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
CHRNA1P02708 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CHRNA1P02708 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.37■□□□□ 0.69
CHRNA1P02708 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.37■□□□□ 0.69
CHRNA1P02708 AL589182.2-201ENST00000619332 1049 ntBASIC19.37■□□□□ 0.69
CHRNA1P02708 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.37■□□□□ 0.69
CHRNA1P02708 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.37■□□□□ 0.69
CHRNA1P02708 PGM5P2-202ENST00000637225 1043 ntBASIC19.37■□□□□ 0.69
CHRNA1P02708 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CHRNA1P02708 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.37■□□□□ 0.69
CHRNA1P02708 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHRNA1P02708 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA1P02708 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHRNA1P02708 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CHRNA1P02708 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHRNA1P02708 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA1P02708 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA1P02708 AP000974.1-201ENST00000623909 2387 ntBASIC19.36■□□□□ 0.69
CHRNA1P02708 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA1P02708 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA1P02708 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA1P02708 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA1P02708 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA1P02708 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHRNA1P02708 AC023274.1-201ENST00000418278 595 ntBASIC19.36■□□□□ 0.69
CHRNA1P02708 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CHRNA1P02708 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA1P02708 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms