Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.71■□□□□ 0.59
LMNAP02545 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LMNAP02545 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMNAP02545 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMNAP02545 AP001271.2-201ENST00000624018 1556 ntBASIC18.71■□□□□ 0.59
LMNAP02545 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LMNAP02545 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMNAP02545 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMNAP02545 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.71■□□□□ 0.59
LMNAP02545 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMNAP02545 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMNAP02545 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LMNAP02545 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LMNAP02545 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
LMNAP02545 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.7■□□□□ 0.58
LMNAP02545 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.7■□□□□ 0.58
LMNAP02545 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.7■□□□□ 0.58
LMNAP02545 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
LMNAP02545 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.7■□□□□ 0.58
LMNAP02545 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
LMNAP02545 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 AC098831.1-202ENST00000438821 336 ntBASIC18.7■□□□□ 0.58
LMNAP02545 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LMNAP02545 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.7■□□□□ 0.58
LMNAP02545 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.7■□□□□ 0.58
LMNAP02545 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.7■□□□□ 0.58
LMNAP02545 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.7■□□□□ 0.58
LMNAP02545 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.7■□□□□ 0.58
LMNAP02545 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.7■□□□□ 0.58
LMNAP02545 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LMNAP02545 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 AC243591.1-201ENST00000452967 1364 ntBASIC18.69■□□□□ 0.58
LMNAP02545 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.69■□□□□ 0.58
LMNAP02545 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LMNAP02545 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.69■□□□□ 0.58
LMNAP02545 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.69■□□□□ 0.58
LMNAP02545 AC009065.1-201ENST00000564055 1225 ntBASIC18.69■□□□□ 0.58
LMNAP02545 MIR3917-201ENST00000580971 93 ntBASIC18.69■□□□□ 0.58
LMNAP02545 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
LMNAP02545 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.69■□□□□ 0.58
LMNAP02545 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LMNAP02545 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.69■□□□□ 0.58
LMNAP02545 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.69■□□□□ 0.58
LMNAP02545 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMNAP02545 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.68■□□□□ 0.58
LMNAP02545 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMNAP02545 AC036111.1-201ENST00000533973 1582 ntBASIC18.68■□□□□ 0.58
LMNAP02545 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMNAP02545 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LMNAP02545 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMNAP02545 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.68■□□□□ 0.58
LMNAP02545 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMNAP02545 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.68■□□□□ 0.58
LMNAP02545 AC141586.3-201ENST00000562166 1838 ntBASIC18.68■□□□□ 0.58
LMNAP02545 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMNAP02545 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMNAP02545 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMNAP02545 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMNAP02545 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMNAP02545 NUS1P2-201ENST00000417358 873 ntBASIC18.68■□□□□ 0.58
LMNAP02545 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.68■□□□□ 0.58
LMNAP02545 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LMNAP02545 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms