Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQA2P01906 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.12■□□□□ 0.17
HLA-DQA2P01906 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.12■□□□□ 0.17
HLA-DQA2P01906 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQA2P01906 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 TSPY15P-201ENST00000457163 923 ntBASIC16.11■□□□□ 0.17
HLA-DQA2P01906 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 AL024508.2-201ENST00000607749 1894 ntBASIC16.11■□□□□ 0.17
HLA-DQA2P01906 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HLA-DQA2P01906 KRT8P9-201ENST00000558927 1449 ntBASIC16.11■□□□□ 0.17
HLA-DQA2P01906 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQA2P01906 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms