Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSPG5O95196 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSPG5O95196 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSPG5O95196 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.66
CSPG5O95196 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.2■□□□□ 0.66
CSPG5O95196 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.2■□□□□ 0.66
CSPG5O95196 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CSPG5O95196 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.2■□□□□ 0.66
CSPG5O95196 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CSPG5O95196 AC125634.1-201ENST00000438758 1403 ntBASIC19.2■□□□□ 0.66
CSPG5O95196 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.2■□□□□ 0.66
CSPG5O95196 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CSPG5O95196 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.2■□□□□ 0.66
CSPG5O95196 BX005266.1-201ENST00000473402 457 ntBASIC19.2■□□□□ 0.66
CSPG5O95196 AC113404.2-201ENST00000507884 177 ntBASIC19.2■□□□□ 0.66
CSPG5O95196 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.2■□□□□ 0.66
CSPG5O95196 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.2■□□□□ 0.66
CSPG5O95196 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.2■□□□□ 0.66
CSPG5O95196 NKAPP1-205ENST00000585790 367 ntBASIC19.2■□□□□ 0.66
CSPG5O95196 AC011467.2-201ENST00000598425 242 ntBASIC19.2■□□□□ 0.66
CSPG5O95196 AC134684.3-201ENST00000641758 218 ntBASIC19.2■□□□□ 0.66
CSPG5O95196 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CSPG5O95196 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CSPG5O95196 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.2■□□□□ 0.66
CSPG5O95196 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
CSPG5O95196 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CSPG5O95196 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSPG5O95196 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CSPG5O95196 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.19■□□□□ 0.66
CSPG5O95196 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CSPG5O95196 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 AC004967.1-201ENST00000453589 447 ntBASIC19.19■□□□□ 0.66
CSPG5O95196 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.19■□□□□ 0.66
CSPG5O95196 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.19■□□□□ 0.66
CSPG5O95196 UNC93B6-202ENST00000528242 690 ntBASIC19.19■□□□□ 0.66
CSPG5O95196 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.19■□□□□ 0.66
CSPG5O95196 MTDHP4-201ENST00000600287 670 ntBASIC19.19■□□□□ 0.66
CSPG5O95196 LINC02084-201ENST00000606069 1096 ntBASIC19.19■□□□□ 0.66
CSPG5O95196 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CSPG5O95196 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.19■□□□□ 0.66
CSPG5O95196 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CSPG5O95196 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CSPG5O95196 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CSPG5O95196 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CSPG5O95196 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.19■□□□□ 0.66
CSPG5O95196 MYLKP1-201ENST00000509077 1580 ntBASIC19.19■□□□□ 0.66
CSPG5O95196 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSPG5O95196 LINC01126-201ENST00000623515 1646 ntBASIC19.18■□□□□ 0.66
CSPG5O95196 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG5O95196 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG5O95196 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG5O95196 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG5O95196 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.18■□□□□ 0.66
CSPG5O95196 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.18■□□□□ 0.66
CSPG5O95196 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG5O95196 AL596442.2-201ENST00000610240 980 ntBASIC19.18■□□□□ 0.66
CSPG5O95196 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG5O95196 AC009154.2-201ENST00000621177 724 ntBASIC19.18■□□□□ 0.66
CSPG5O95196 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.18■□□□□ 0.66
CSPG5O95196 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG5O95196 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CSPG5O95196 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG5O95196 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CSPG5O95196 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG5O95196 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSPG5O95196 AC004817.3-201ENST00000602957 2129 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms