Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PCDHGA12O60330 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGA12O60330 MIR1233-2-201ENST00000408138 82 ntBASIC17.75■□□□□ 0.43
PCDHGA12O60330 MIR1233-1-201ENST00000408722 82 ntBASIC17.75■□□□□ 0.43
PCDHGA12O60330 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA12O60330 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA12O60330 POLD2P1-201ENST00000511220 997 ntBASIC17.75■□□□□ 0.43
PCDHGA12O60330 AC092865.5-201ENST00000545435 363 ntBASIC17.75■□□□□ 0.43
PCDHGA12O60330 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGA12O60330 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDHGA12O60330 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA12O60330 MTDHP3-201ENST00000594186 672 ntBASIC17.75■□□□□ 0.43
PCDHGA12O60330 TERC-201ENST00000602385 541 ntBASIC17.75■□□□□ 0.43
PCDHGA12O60330 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA12O60330 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA12O60330 AL031598.1-201ENST00000561511 1773 ntBASIC17.75■□□□□ 0.43
PCDHGA12O60330 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.75■□□□□ 0.43
PCDHGA12O60330 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGA12O60330 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA12O60330 AC009102.3-201ENST00000623118 1491 ntBASIC17.75■□□□□ 0.43
PCDHGA12O60330 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA12O60330 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 PCDHB18P-201ENST00000524813 2368 ntBASIC17.74■□□□□ 0.43
PCDHGA12O60330 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 AC020763.4-201ENST00000623414 4170 ntBASIC17.74■□□□□ 0.43
PCDHGA12O60330 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 AL049840.3-201ENST00000602669 611 ntBASIC17.74■□□□□ 0.43
PCDHGA12O60330 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGA12O60330 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA12O60330 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGA12O60330 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA12O60330 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms