Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LCMT2O60294 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LCMT2O60294 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.13■□□□□ 0.33
LCMT2O60294 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LCMT2O60294 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LCMT2O60294 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.13■□□□□ 0.33
LCMT2O60294 AC012317.2-201ENST00000623305 2251 ntBASIC17.13■□□□□ 0.33
LCMT2O60294 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LCMT2O60294 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LCMT2O60294 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.13■□□□□ 0.33
LCMT2O60294 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
LCMT2O60294 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LCMT2O60294 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LCMT2O60294 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
LCMT2O60294 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.13■□□□□ 0.33
LCMT2O60294 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LCMT2O60294 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LCMT2O60294 ATP5G2P1-201ENST00000433580 426 ntBASIC17.13■□□□□ 0.33
LCMT2O60294 SLC25A6P5-201ENST00000435663 894 ntBASIC17.13■□□□□ 0.33
LCMT2O60294 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.13■□□□□ 0.33
LCMT2O60294 TPSP2-201ENST00000561760 610 ntBASIC17.13■□□□□ 0.33
LCMT2O60294 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LCMT2O60294 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LCMT2O60294 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LCMT2O60294 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LCMT2O60294 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.13■□□□□ 0.33
LCMT2O60294 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LCMT2O60294 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LCMT2O60294 AC067852.2-201ENST00000590513 2313 ntBASIC17.13■□□□□ 0.33
LCMT2O60294 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LCMT2O60294 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.13■□□□□ 0.33
LCMT2O60294 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LCMT2O60294 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LCMT2O60294 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.12■□□□□ 0.33
LCMT2O60294 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 DRAXINP1-201ENST00000437611 948 ntBASIC17.12■□□□□ 0.33
LCMT2O60294 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
LCMT2O60294 AC011840.4-201ENST00000578471 627 ntBASIC17.12■□□□□ 0.33
LCMT2O60294 AP005901.3-202ENST00000581653 237 ntBASIC17.12■□□□□ 0.33
LCMT2O60294 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.12■□□□□ 0.33
LCMT2O60294 AC092119.3-201ENST00000612618 583 ntBASIC17.12■□□□□ 0.33
LCMT2O60294 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.12■□□□□ 0.33
LCMT2O60294 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.12■□□□□ 0.33
LCMT2O60294 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LCMT2O60294 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.12■□□□□ 0.33
LCMT2O60294 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.11■□□□□ 0.33
LCMT2O60294 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.11■□□□□ 0.33
LCMT2O60294 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.11■□□□□ 0.33
LCMT2O60294 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.11■□□□□ 0.33
LCMT2O60294 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.11■□□□□ 0.33
LCMT2O60294 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.11■□□□□ 0.33
LCMT2O60294 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.11■□□□□ 0.33
LCMT2O60294 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.11■□□□□ 0.33
LCMT2O60294 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.11■□□□□ 0.33
LCMT2O60294 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms