Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSX4O60224 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSX4O60224 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSX4O60224 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSX4O60224 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SSX4O60224 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSX4O60224 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SSX4O60224 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.28■□□□□ 0.2
SSX4O60224 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX4O60224 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.28■□□□□ 0.2
SSX4O60224 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SSX4O60224 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SSX4O60224 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX4O60224 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SSX4O60224 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
SSX4O60224 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX4O60224 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SSX4O60224 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX4O60224 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX4O60224 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.28■□□□□ 0.2
SSX4O60224 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX4O60224 COX11P1-201ENST00000489116 835 ntBASIC16.28■□□□□ 0.2
SSX4O60224 YBX1P2-201ENST00000489612 999 ntBASIC16.28■□□□□ 0.2
SSX4O60224 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.28■□□□□ 0.2
SSX4O60224 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.28■□□□□ 0.2
SSX4O60224 AL138966.2-201ENST00000621997 464 ntBASIC16.28■□□□□ 0.2
SSX4O60224 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.28■□□□□ 0.2
SSX4O60224 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SSX4O60224 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SSX4O60224 AC138028.4-201ENST00000564984 1845 ntBASIC16.28■□□□□ 0.2
SSX4O60224 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
SSX4O60224 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.28■□□□□ 0.2
SSX4O60224 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX4O60224 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.27■□□□□ 0.2
SSX4O60224 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SSX4O60224 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.27■□□□□ 0.2
SSX4O60224 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.27■□□□□ 0.2
SSX4O60224 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SSX4O60224 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.27■□□□□ 0.2
SSX4O60224 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.27■□□□□ 0.2
SSX4O60224 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.27■□□□□ 0.2
SSX4O60224 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.27■□□□□ 0.2
SSX4O60224 TSPY5P-201ENST00000426936 936 ntBASIC16.27■□□□□ 0.2
SSX4O60224 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.27■□□□□ 0.2
SSX4O60224 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.27■□□□□ 0.2
SSX4O60224 AL358472.4-201ENST00000633140 710 ntBASIC16.27■□□□□ 0.2
SSX4O60224 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.27■□□□□ 0.2
SSX4O60224 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SSX4O60224 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX4O60224 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SSX4O60224 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSX4O60224 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSX4O60224 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SSX4O60224 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
SSX4O60224 AC092338.2-201ENST00000568827 1415 ntBASIC16.27■□□□□ 0.19
SSX4O60224 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSX4O60224 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SSX4O60224 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.27■□□□□ 0.19
SSX4O60224 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SSX4O60224 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.26■□□□□ 0.19
SSX4O60224 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.26■□□□□ 0.19
SSX4O60224 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
SSX4O60224 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.26■□□□□ 0.19
SSX4O60224 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.26■□□□□ 0.19
SSX4O60224 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX4O60224 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms