Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC11O43248 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC11O43248 AC008735.5-201ENST00000623544 497 ntBASIC18.18■□□□□ 0.5
HOXC11O43248 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXC11O43248 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC11O43248 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC11O43248 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HOXC11O43248 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC11O43248 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC11O43248 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXC11O43248 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC11O43248 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 ZNF259P1-201ENST00000407656 1365 ntBASIC18.17■□□□□ 0.5
HOXC11O43248 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC11O43248 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HOXC11O43248 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC11O43248 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC11O43248 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC11O43248 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.17■□□□□ 0.5
HOXC11O43248 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC11O43248 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
HOXC11O43248 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.17■□□□□ 0.5
HOXC11O43248 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.17■□□□□ 0.5
HOXC11O43248 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC11O43248 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC11O43248 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.17■□□□□ 0.5
HOXC11O43248 AC012640.2-201ENST00000561606 901 ntBASIC18.17■□□□□ 0.5
HOXC11O43248 AC145285.3-201ENST00000564603 959 ntBASIC18.17■□□□□ 0.5
HOXC11O43248 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC11O43248 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
HOXC11O43248 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
HOXC11O43248 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC11O43248 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXC11O43248 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HOXC11O43248 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 SIGLEC16-201ENST00000599858 1437 ntBASIC18.16■□□□□ 0.5
HOXC11O43248 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC11O43248 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
HOXC11O43248 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HOXC11O43248 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.16■□□□□ 0.5
HOXC11O43248 LAGE3P1-201ENST00000425356 484 ntBASIC18.16■□□□□ 0.5
HOXC11O43248 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.16■□□□□ 0.5
HOXC11O43248 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXC11O43248 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC11O43248 AL022326.1-202ENST00000641533 845 ntBASIC18.16■□□□□ 0.5
HOXC11O43248 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXC11O43248 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HOXC11O43248 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC11O43248 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC11O43248 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC11O43248 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC11O43248 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HOXC11O43248 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
HOXC11O43248 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.15■□□□□ 0.5
HOXC11O43248 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
HOXC11O43248 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC11O43248 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.15■□□□□ 0.5
HOXC11O43248 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.15■□□□□ 0.5
HOXC11O43248 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC11O43248 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC11O43248 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.15■□□□□ 0.5
HOXC11O43248 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC11O43248 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC11O43248 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.15■□□□□ 0.5
HOXC11O43248 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.15■□□□□ 0.5
HOXC11O43248 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HOXC11O43248 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HOXC11O43248 SPDYE21P-201ENST00000413323 827 ntBASIC18.15■□□□□ 0.5
HOXC11O43248 PRYP5-201ENST00000451909 266 ntBASIC18.15■□□□□ 0.5
HOXC11O43248 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC11O43248 AC006538.3-201ENST00000612495 578 ntBASIC18.15■□□□□ 0.5
HOXC11O43248 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.15■□□□□ 0.5
HOXC11O43248 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms