Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SMAD9O15198 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.29■□□□□ 0.2
SMAD9O15198 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.29■□□□□ 0.2
SMAD9O15198 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SMAD9O15198 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.29■□□□□ 0.2
SMAD9O15198 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.29■□□□□ 0.2
SMAD9O15198 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 KRT89P-201ENST00000620027 1478 ntBASIC16.29■□□□□ 0.2
SMAD9O15198 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD9O15198 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
SMAD9O15198 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SMAD9O15198 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD9O15198 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD9O15198 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SMAD9O15198 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD9O15198 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD9O15198 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD9O15198 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.28■□□□□ 0.2
SMAD9O15198 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD9O15198 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.28■□□□□ 0.2
SMAD9O15198 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD9O15198 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.28■□□□□ 0.2
SMAD9O15198 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD9O15198 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.28■□□□□ 0.2
SMAD9O15198 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.28■□□□□ 0.2
SMAD9O15198 PCED1CP-201ENST00000419887 785 ntBASIC16.28■□□□□ 0.2
SMAD9O15198 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.28■□□□□ 0.2
SMAD9O15198 AP003733.1-201ENST00000491725 852 ntBASIC16.28■□□□□ 0.2
SMAD9O15198 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.28■□□□□ 0.2
SMAD9O15198 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.28■□□□□ 0.2
SMAD9O15198 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.28■□□□□ 0.2
SMAD9O15198 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
SMAD9O15198 AC008687.5-201ENST00000593746 558 ntBASIC16.28■□□□□ 0.2
SMAD9O15198 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.28■□□□□ 0.2
SMAD9O15198 AL358472.4-201ENST00000633140 710 ntBASIC16.28■□□□□ 0.2
SMAD9O15198 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.28■□□□□ 0.2
SMAD9O15198 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD9O15198 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.28■□□□□ 0.2
SMAD9O15198 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SMAD9O15198 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SMAD9O15198 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.28■□□□□ 0.2
SMAD9O15198 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.28■□□□□ 0.2
SMAD9O15198 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD9O15198 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.28■□□□□ 0.2
SMAD9O15198 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.28■□□□□ 0.2
SMAD9O15198 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD9O15198 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SMAD9O15198 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SMAD9O15198 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD9O15198 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
SMAD9O15198 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD9O15198 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD9O15198 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD9O15198 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD9O15198 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD9O15198 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD9O15198 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.27■□□□□ 0.2
SMAD9O15198 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.27■□□□□ 0.2
SMAD9O15198 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD9O15198 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SMAD9O15198 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD9O15198 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD9O15198 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD9O15198 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SMAD9O15198 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
SMAD9O15198 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.27■□□□□ 0.2
SMAD9O15198 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.27■□□□□ 0.2
SMAD9O15198 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.27■□□□□ 0.2
SMAD9O15198 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.27■□□□□ 0.2
SMAD9O15198 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.27■□□□□ 0.2
SMAD9O15198 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.27■□□□□ 0.2
SMAD9O15198 RNF126P1-202ENST00000569893 925 ntBASIC16.27■□□□□ 0.2
SMAD9O15198 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.27■□□□□ 0.2
SMAD9O15198 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.27■□□□□ 0.2
SMAD9O15198 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.27■□□□□ 0.2
SMAD9O15198 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD9O15198 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.27■□□□□ 0.2
SMAD9O15198 AC068880.1-201ENST00000507289 2297 ntBASIC16.27■□□□□ 0.2
SMAD9O15198 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD9O15198 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD9O15198 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.27■□□□□ 0.19
SMAD9O15198 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD9O15198 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SMAD9O15198 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.27■□□□□ 0.19
SMAD9O15198 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD9O15198 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD9O15198 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.27■□□□□ 0.19
SMAD9O15198 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.27■□□□□ 0.19
SMAD9O15198 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.27■□□□□ 0.19
SMAD9O15198 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
SMAD9O15198 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD9O15198 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD9O15198 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD9O15198 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD9O15198 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms