Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC28.72■■■□□ 2.19
CHD1O14646 COQ6-210ENST00000554920 649 ntTSL 3 BASIC28.72■■■□□ 2.19
CHD1O14646 AL132655.2-201ENST00000596276 594 ntBASIC28.72■■■□□ 2.19
CHD1O14646 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC28.72■■■□□ 2.19
CHD1O14646 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC28.72■■■□□ 2.19
CHD1O14646 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC28.72■■■□□ 2.19
CHD1O14646 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHD1O14646 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CHD1O14646 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHD1O14646 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHD1O14646 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHD1O14646 SPDYE14P-201ENST00000442619 822 ntBASIC28.72■■■□□ 2.19
CHD1O14646 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
CHD1O14646 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CHD1O14646 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHD1O14646 RPL28-209ENST00000560055 670 ntTSL 3 BASIC28.72■■■□□ 2.19
CHD1O14646 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CHD1O14646 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC28.72■■■□□ 2.19
CHD1O14646 IFT20-216ENST00000588477 774 ntTSL 5 BASIC28.72■■■□□ 2.19
CHD1O14646 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC28.72■■■□□ 2.19
CHD1O14646 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
CHD1O14646 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC28.71■■■□□ 2.19
CHD1O14646 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CHD1O14646 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHD1O14646 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC28.71■■■□□ 2.19
CHD1O14646 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
CHD1O14646 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHD1O14646 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC28.71■■■□□ 2.19
CHD1O14646 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
CHD1O14646 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHD1O14646 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CHD1O14646 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC28.7■■■□□ 2.19
CHD1O14646 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.19
CHD1O14646 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CHD1O14646 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
CHD1O14646 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CHD1O14646 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
CHD1O14646 CALY-202ENST00000368555 783 ntTSL 2 BASIC28.7■■■□□ 2.19
CHD1O14646 ARSEP1-201ENST00000420443 635 ntBASIC28.7■■■□□ 2.19
CHD1O14646 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC28.7■■■□□ 2.19
CHD1O14646 AC005237.2-201ENST00000434368 219 ntBASIC28.7■■■□□ 2.19
CHD1O14646 AC140658.5-201ENST00000438532 169 ntBASIC28.7■■■□□ 2.19
CHD1O14646 RN7SL589P-201ENST00000481268 310 ntBASIC28.7■■■□□ 2.19
CHD1O14646 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC28.7■■■□□ 2.19
CHD1O14646 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CHD1O14646 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
CHD1O14646 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CHD1O14646 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC28.7■■■□□ 2.18
CHD1O14646 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC28.7■■■□□ 2.18
CHD1O14646 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CHD1O14646 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC28.69■■■□□ 2.18
CHD1O14646 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC28.69■■■□□ 2.18
CHD1O14646 AC069120.2-201ENST00000524091 540 ntBASIC28.69■■■□□ 2.18
CHD1O14646 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC28.69■■■□□ 2.18
CHD1O14646 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC28.69■■■□□ 2.18
CHD1O14646 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHD1O14646 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
CHD1O14646 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC28.69■■■□□ 2.18
CHD1O14646 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC28.69■■■□□ 2.18
CHD1O14646 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHD1O14646 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHD1O14646 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CHD1O14646 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHD1O14646 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC28.69■■■□□ 2.18
CHD1O14646 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CHD1O14646 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHD1O14646 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC28.69■■■□□ 2.18
CHD1O14646 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHD1O14646 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC28.69■■■□□ 2.18
CHD1O14646 AL592309.1-201ENST00000443127 649 ntBASIC28.69■■■□□ 2.18
CHD1O14646 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC28.69■■■□□ 2.18
CHD1O14646 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHD1O14646 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHD1O14646 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHD1O14646 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHD1O14646 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CHD1O14646 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHD1O14646 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC28.68■■■□□ 2.18
CHD1O14646 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC28.68■■■□□ 2.18
CHD1O14646 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC28.68■■■□□ 2.18
CHD1O14646 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC28.68■■■□□ 2.18
CHD1O14646 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CHD1O14646 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHD1O14646 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC28.68■■■□□ 2.18
CHD1O14646 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CHD1O14646 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC28.67■■■□□ 2.18
CHD1O14646 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC28.67■■■□□ 2.18
CHD1O14646 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CHD1O14646 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
CHD1O14646 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CHD1O14646 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC28.67■■■□□ 2.18
CHD1O14646 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC28.67■■■□□ 2.18
CHD1O14646 AC004890.2-204ENST00000481968 304 ntBASIC28.67■■■□□ 2.18
CHD1O14646 HILS1-202ENST00000545329 423 ntBASIC28.67■■■□□ 2.18
CHD1O14646 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CHD1O14646 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC28.67■■■□□ 2.18
CHD1O14646 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CHD1O14646 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC28.67■■■□□ 2.18
CHD1O14646 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC28.67■■■□□ 2.18
CHD1O14646 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms