Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
O00370 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
O00370 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
O00370 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
O00370 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
O00370 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
O00370 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
O00370 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
O00370 AC016734.2-201ENST00000624325 1377 ntBASIC19.1■□□□□ 0.65
O00370 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
O00370 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
O00370 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
O00370 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
O00370 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.1■□□□□ 0.65
O00370 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.1■□□□□ 0.65
O00370 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.1■□□□□ 0.65
O00370 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
O00370 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.1■□□□□ 0.65
O00370 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.1■□□□□ 0.65
O00370 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
O00370 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.1■□□□□ 0.65
O00370 PRORSD1P-202ENST00000563365 2154 ntBASIC19.1■□□□□ 0.65
O00370 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
O00370 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.1■□□□□ 0.65
O00370 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
O00370 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
O00370 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
O00370 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
O00370 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
O00370 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.09■□□□□ 0.65
O00370 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.09■□□□□ 0.65
O00370 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.09■□□□□ 0.65
O00370 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.09■□□□□ 0.65
O00370 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
O00370 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.09■□□□□ 0.65
O00370 RN7SL606P-201ENST00000472779 293 ntBASIC19.09■□□□□ 0.65
O00370 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.09■□□□□ 0.65
O00370 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.09■□□□□ 0.65
O00370 AL121672.3-201ENST00000608644 468 ntBASIC19.09■□□□□ 0.65
O00370 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.09■□□□□ 0.65
O00370 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.09■□□□□ 0.65
O00370 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.09■□□□□ 0.65
O00370 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
O00370 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.09■□□□□ 0.65
O00370 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
O00370 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.09■□□□□ 0.65
O00370 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
O00370 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
O00370 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
O00370 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.08■□□□□ 0.65
O00370 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
O00370 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
O00370 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.08■□□□□ 0.65
O00370 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
O00370 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
O00370 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
O00370 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
O00370 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.08■□□□□ 0.64
O00370 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.08■□□□□ 0.64
O00370 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
O00370 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
O00370 BX276092.5-203ENST00000456199 560 ntBASIC19.08■□□□□ 0.64
O00370 AC068472.1-201ENST00000474589 881 ntBASIC19.08■□□□□ 0.64
O00370 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.08■□□□□ 0.64
O00370 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
O00370 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.08■□□□□ 0.64
O00370 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
O00370 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
O00370 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
O00370 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
O00370 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
O00370 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
O00370 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
O00370 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.08■□□□□ 0.64
O00370 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
O00370 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.08■□□□□ 0.64
O00370 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
O00370 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.08■□□□□ 0.64
O00370 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
O00370 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
O00370 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.07■□□□□ 0.64
O00370 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.07■□□□□ 0.64
O00370 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms